Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM47Q96LD4 MIR128-1-201ENST00000384921 82 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 U3.26-201ENST00000391236 204 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 RNA5SP127-201ENST00000411051 133 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM47Q96LD4 SNORD105B-201ENST00000458770 79 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 AL049873.1-201ENST00000480540 376 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 RNU1-117P-201ENST00000517041 158 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 AC025281.1-201ENST00000567026 265 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 AC006065.5-201ENST00000623427 349 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 AC068205.3-201ENST00000636385 468 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM47Q96LD4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM47Q96LD4 MAPK10-373ENST00000641983 6772 ntBASIC4.37□□□□□ -1.71
TRIM47Q96LD4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM47Q96LD4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM47Q96LD4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 Y_RNA.634-201ENST00000364811 113 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 RNU1-100P-201ENST00000365255 165 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 RNU6-24P-201ENST00000384440 107 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 CBX3P9-201ENST00000402326 552 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 RNA5SP504-201ENST00000410676 117 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AC004866.1-201ENST00000411748 78 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AC008155.2-201ENST00000464337 397 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 RN7SL807P-201ENST00000470923 297 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 RPL23AP54-201ENST00000495129 419 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AC097639.2-201ENST00000603159 172 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AC136601.2-201ENST00000604356 474 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 MIR486-1-201ENST00000612171 68 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AC090132.2-201ENST00000615881 347 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 MIR4662A-201ENST00000637499 67 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 AL672296.1-201ENST00000427780 2158 ntBASIC4.36□□□□□ -1.71
TRIM47Q96LD4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM47Q96LD4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 RNU6-776P-201ENST00000364403 104 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 RNU6-1022P-201ENST00000365049 104 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 Y_RNA.313-201ENST00000365095 103 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 AP002088.1-201ENST00000382740 395 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 RPL27AP8-201ENST00000424277 446 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 CKS1BP5-201ENST00000434172 273 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 AP001486.1-201ENST00000463339 476 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 RNU6-344P-201ENST00000516635 111 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 RN7SKP289-201ENST00000517244 295 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 CKS1BP7-201ENST00000522230 235 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 AL360157.1-201ENST00000565962 87 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 MIR8058-201ENST00000615737 89 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 AL137067.1-201ENST00000615933 120 ntBASIC4.35□□□□□ -1.71
TRIM47Q96LD4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM47Q96LD4 ADAM3A-203ENST00000461344 2157 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM47Q96LD4 MFSD8-236ENST00000641509 4050 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM47Q96LD4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
TRIM47Q96LD4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM47Q96LD4 MIR199A2-201ENST00000385289 110 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 RPL21P3-201ENST00000395517 478 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 RNA5SP239-201ENST00000410218 129 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 AL139281.1-201ENST00000422120 335 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 RNA5SP236-201ENST00000516169 116 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 SNORA31.8-201ENST00000516327 108 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 MIR3921-201ENST00000577308 85 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 AC007229.1-201ENST00000590455 412 ntBASIC4.34□□□□□ -1.71
TRIM47Q96LD4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM47Q96LD4 AC007256.1-201ENST00000392253 2765 ntBASIC4.34□□□□□ -1.72
TRIM47Q96LD4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM47Q96LD4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.34□□□□□ -1.72
TRIM47Q96LD4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM47Q96LD4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM47Q96LD4 RNY4P6-201ENST00000363667 96 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 RNU6-674P-201ENST00000363831 107 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 SNORA63D-201ENST00000364359 132 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 Y_RNA.290-201ENST00000364879 114 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 Y_RNA.366-201ENST00000365540 102 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 SNORD116-13-201ENST00000384408 92 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 Y_RNA.500-201ENST00000384466 111 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 RNU1-89P-201ENST00000384592 164 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms