Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MIR300-201ENST00000401138 83 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.8□□□□□ -1.96
HPS3Q969F9 IFNA11P-201ENST00000446352 526 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 PCNPP5-201ENST00000452246 481 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 AC091179.3-201ENST00000474761 144 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 AC096725.1-201ENST00000514266 313 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 RNA5SP320-201ENST00000516263 124 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 Y_RNA.713-201ENST00000517013 96 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.8□□□□□ -1.96
HPS3Q969F9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
HPS3Q969F9 MZT1P2-201ENST00000604387 248 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 AL121655.1-201ENST00000605811 308 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 MIR6715A-201ENST00000615929 79 ntBASIC2.8□□□□□ -1.96
HPS3Q969F9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.8□□□□□ -1.96
HPS3Q969F9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HPS3Q969F9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HPS3Q969F9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HPS3Q969F9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.79□□□□□ -1.96
HPS3Q969F9 RNA5SP393-201ENST00000363423 117 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 Y_RNA.145-201ENST00000363527 102 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 Y_RNA.152-201ENST00000363578 100 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 RNU6-727P-201ENST00000363592 107 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 RNU6-708P-201ENST00000384217 107 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 Y_RNA.551-201ENST00000384661 102 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HPS3Q969F9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS3Q969F9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS3Q969F9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS3Q969F9 AC074133.1-201ENST00000515696 183 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 RNU6-327P-201ENST00000516270 127 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 RNU6-667P-201ENST00000517186 102 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 RRN3P3-201ENST00000549207 578 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS3Q969F9 AL360085.1-201ENST00000604713 532 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 PART1_1.1-201ENST00000611761 217 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 MIR1248-201ENST00000629190 106 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 U6.92-201ENST00000636464 89 ntBASIC2.79□□□□□ -1.96
HPS3Q969F9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HPS3Q969F9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
HPS3Q969F9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.78□□□□□ -1.96
HPS3Q969F9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HPS3Q969F9 SNORA63C-201ENST00000364578 129 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 RNU6-450P-201ENST00000364654 107 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 Y_RNA.471-201ENST00000384312 102 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 RNU6-738P-201ENST00000384531 106 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 MIR1252-201ENST00000408861 65 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 AC004866.1-201ENST00000411748 78 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.78□□□□□ -1.96
HPS3Q969F9 UQCRBP2-201ENST00000447827 297 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 AC074290.1-201ENST00000448883 135 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 U8.20-201ENST00000459445 131 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 RNU6-1012P-201ENST00000516606 109 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 RNU1-117P-201ENST00000517041 158 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 RNU6-1137P-201ENST00000517073 99 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 Y_RNA.715-201ENST00000517082 110 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 RNA5SP490-201ENST00000517141 136 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 RNU1-104P-201ENST00000517280 175 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.78□□□□□ -1.96
HPS3Q969F9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.78□□□□□ -1.96
HPS3Q969F9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.78□□□□□ -1.96
HPS3Q969F9 AC068205.3-201ENST00000636385 468 ntBASIC2.78□□□□□ -1.96
HPS3Q969F9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.77□□□□□ -1.97
HPS3Q969F9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HPS3Q969F9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HPS3Q969F9 SNORD31B-201ENST00000364977 69 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 RNU6-926P-201ENST00000384075 107 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 RNU6-443P-201ENST00000384780 107 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 HMGN2P18-201ENST00000450680 270 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 AC114982.1-201ENST00000469402 321 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 AC018868.1-201ENST00000491307 315 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 Y_RNA.720-201ENST00000517166 92 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 AC034114.1-201ENST00000520293 285 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 AC113195.1-201ENST00000579952 141 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 MIR4659A-201ENST00000580269 81 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 MIR4753-201ENST00000585119 83 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 AC008737.2-201ENST00000599446 118 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 Y_RNA.772-201ENST00000606692 102 ntBASIC2.77□□□□□ -1.97
HPS3Q969F9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
HPS3Q969F9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
HPS3Q969F9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 MIR518C-201ENST00000384822 101 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 MRPL35P1-201ENST00000404272 572 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.76□□□□□ -1.97
HPS3Q969F9 AC010469.2-201ENST00000496412 480 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.76□□□□□ -1.97
HPS3Q969F9 SNORA40.9-201ENST00000515895 93 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 RNU6-1045P-201ENST00000516321 107 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.76□□□□□ -1.97
HPS3Q969F9 AL355297.3-201ENST00000604082 446 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 AC240442.1-201ENST00000616055 283 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 AL078596.1-201ENST00000624856 447 ntBASIC2.76□□□□□ -1.97
HPS3Q969F9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HPS3Q969F9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
HPS3Q969F9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HPS3Q969F9 RNU6-545P-201ENST00000362681 104 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 Y_RNA.498-201ENST00000384460 102 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 MIR586-201ENST00000385035 97 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 MIR1283-1-201ENST00000408494 87 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms