Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU4-11P-201ENST00000365287 132 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 RNU6-969P-201ENST00000383900 105 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 MIR586-201ENST00000385035 97 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 MIR616-201ENST00000385293 97 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 ARF4P2-201ENST00000430209 526 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.2□□□□□ -1.9
NUP43Q8NFH3 SNORA59A-201ENST00000459326 152 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 AC025518.1-201ENST00000479856 347 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 SRIP1-201ENST00000489235 288 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
NUP43Q8NFH3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 DNAJC19P2-201ENST00000593340 302 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 AC025754.2-201ENST00000606491 432 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 U7.8-201ENST00000619968 63 ntBASIC3.2□□□□□ -1.9
NUP43Q8NFH3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NUP43Q8NFH3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NUP43Q8NFH3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NUP43Q8NFH3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.2□□□□□ -1.9
NUP43Q8NFH3 AC058791.1-201ENST00000608412 3198 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 Y_RNA.172-201ENST00000363765 102 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 AL139281.1-201ENST00000422120 335 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 RPS4XP2-201ENST00000458402 793 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 RNU6-1007P-201ENST00000516586 107 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 MIR2276-201ENST00000516886 89 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 MIR4474-201ENST00000579189 78 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 MIR3200-201ENST00000580767 85 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 RPL17P51-201ENST00000605218 238 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 AL391903.3-201ENST00000612158 163 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 AC017071.1-201ENST00000564407 2204 ntBASIC3.19□□□□□ -1.9
NUP43Q8NFH3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
NUP43Q8NFH3 AL021368.2-201ENST00000606125 5352 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 RNU6-1205P-201ENST00000363625 106 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 AP002088.1-201ENST00000382740 395 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 MIR218-2-201ENST00000385006 110 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 SNORA40-201ENST00000388090 126 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 EIF4EP4-201ENST00000424916 578 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 MTND4LP9-201ENST00000427694 174 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 AC245047.8-201ENST00000456455 284 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 HMGN2P9-201ENST00000476875 229 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 SNORA25.12-201ENST00000516202 82 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 MIR5047-201ENST00000579212 100 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 MIR5688-201ENST00000580619 83 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 MIR5195-201ENST00000583555 115 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 RMST_8.1-201ENST00000610287 165 ntBASIC3.18□□□□□ -1.9
NUP43Q8NFH3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.18□□□□□ -1.9
NUP43Q8NFH3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 RNU4-35P-201ENST00000362588 141 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 Y_RNA.124-201ENST00000363339 93 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 Y_RNA.218-201ENST00000364218 104 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 MIR1185-2-201ENST00000408687 86 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 RN7SKP111-201ENST00000410349 271 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 Z92545.1-201ENST00000411782 234 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 RBMY2UP-201ENST00000453474 324 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 SNORA70.12-201ENST00000516084 153 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 IGKV2-26-201ENST00000518305 343 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 AC012640.5-201ENST00000623897 319 ntBASIC3.17□□□□□ -1.9
NUP43Q8NFH3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.17□□□□□ -1.9
NUP43Q8NFH3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
NUP43Q8NFH3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NUP43Q8NFH3 Y_RNA.229-201ENST00000364347 113 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms