Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC010099.1-201ENST00000455434 375 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 RPS3P1-201ENST00000456781 192 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 snoU13.28-201ENST00000459235 104 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 RN7SL75P-201ENST00000461926 281 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 UBL5P3-201ENST00000475112 231 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 RNA5SP148-201ENST00000516527 94 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AC024405.2-202ENST00000532731 184 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AP002392.1-201ENST00000537692 208 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AL137100.2-201ENST00000555786 315 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AC008749.1-201ENST00000597650 306 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 Z83818.1-201ENST00000603584 150 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AC022441.3-201ENST00000605737 136 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AC010999.1-201ENST00000611856 324 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AC064859.1-201ENST00000624741 174 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 MIR3199-2-201ENST00000636243 86 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 FAM35CP-201ENST00000554755 2470 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 SNORA25.1-201ENST00000362326 128 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-47P-201ENST00000383866 107 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-1077P-201ENST00000410506 102 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.638-201ENST00000459374 113 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 AC091179.3-201ENST00000474761 144 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 AC115990.1-201ENST00000526957 301 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 RPL21P9-201ENST00000556149 474 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 SNORD53-201ENST00000579969 78 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 AC005176.2-201ENST00000596933 147 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 MZT1P2-201ENST00000604387 248 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 MIR7843-201ENST00000622274 79 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 SNORD98-201ENST00000636377 67 ntBASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SLC44A3Q8N4M1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 ZNF204P-201ENST00000416749 2397 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 AC135776.4-201ENST00000624300 1904 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 MTND5P35-201ENST00000557537 1720 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.331-201ENST00000365267 102 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-662P-201ENST00000384253 104 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-748P-201ENST00000384648 107 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 MIR549A-201ENST00000385268 96 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-493P-201ENST00000391321 108 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 ELOCP21-201ENST00000412558 336 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 PTGES3P4-201ENST00000426243 356 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 snoU13.14-201ENST00000459372 104 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 RPL30P14-201ENST00000482744 348 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 AC096725.1-201ENST00000514266 313 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 AC074133.1-201ENST00000515696 183 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 RNA5SP24-201ENST00000516478 95 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 SNORA27.4-201ENST00000516650 95 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 SNORA31.21-201ENST00000517180 77 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 AP002001.1-203ENST00000534002 267 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 CYP4A27P-201ENST00000567218 190 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 AC037487.3-201ENST00000606668 112 ntBASIC2.86□□□□□ -1.95
SLC44A3Q8N4M1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 AL157777.2-201ENST00000258070 137 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-774P-201ENST00000363238 107 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.217-201ENST00000364214 105 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.383-201ENST00000383855 97 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-245P-201ENST00000384020 107 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RNA5SP201-201ENST00000410316 124 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.595-201ENST00000410403 105 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RNU2-61P-201ENST00000411069 191 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-1199P-201ENST00000411249 104 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 COX6CP10-201ENST00000416832 224 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.641-201ENST00000459414 105 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RNU7-23P-201ENST00000459465 62 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RN7SL633P-201ENST00000488974 297 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 AIG1P1-201ENST00000503376 148 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 SNORA25.14-201ENST00000516481 132 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 AC007536.1-201ENST00000533382 349 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 AC018448.1-201ENST00000552843 316 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 MIR3136-201ENST00000583498 78 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RPS15AP11-201ENST00000594193 385 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-91P-201ENST00000607774 107 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 AL138880.2-201ENST00000616214 239 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 U2.22-201ENST00000636441 106 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC44A3Q8N4M1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms