Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNU6-971P-201ENST00000516920 106 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 RNU7-116P-201ENST00000516940 62 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 RNU6-586P-201ENST00000517265 104 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX5Q8N196 SCARNA17.4-201ENST00000614296 143 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX5Q8N196 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX5Q8N196 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX5Q8N196 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX5Q8N196 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
SIX5Q8N196 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX5Q8N196 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX5Q8N196 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX5Q8N196 RNU1-15P-201ENST00000353977 144 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 RNA5SP50-201ENST00000363731 107 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 RNA5SP139-201ENST00000364340 117 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 MIR539-201ENST00000365690 78 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 SNORD116-13-201ENST00000384408 92 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 RNA5SP306-201ENST00000411087 107 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX5Q8N196 AC010154.1-201ENST00000425857 269 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX5Q8N196 RNU6-221P-201ENST00000459541 99 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX5Q8N196 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX5Q8N196 CYP4A43P-201ENST00000568156 121 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 LARP7P3-201ENST00000579888 337 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 POLR3GP1-201ENST00000594073 261 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 AP003357.1-201ENST00000604497 148 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 AC110079.1-202ENST00000635213 138 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX5Q8N196 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SIX5Q8N196 AC091152.2-201ENST00000591628 2569 ntBASIC3.93□□□□□ -1.78
SIX5Q8N196 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SIX5Q8N196 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SIX5Q8N196 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX5Q8N196 Y_RNA.81-201ENST00000362997 102 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 RNU6-944P-201ENST00000364023 107 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 RNU6-438P-201ENST00000365561 103 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 Y_RNA.420-201ENST00000384043 110 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 RNY3P5-201ENST00000384127 102 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 MIR128-1-201ENST00000384921 82 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 SNORA79-201ENST00000408376 140 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 MIR1251-201ENST00000408552 70 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX5Q8N196 SNORD65B-201ENST00000459126 73 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 RPL23AP54-201ENST00000495129 419 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 SNORD59.2-201ENST00000516873 68 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.92□□□□□ -1.78
SIX5Q8N196 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX5Q8N196 AC127455.1-201ENST00000565496 145 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 AC005972.2-201ENST00000604690 348 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 MIR6844-201ENST00000637122 62 ntBASIC3.92□□□□□ -1.78
SIX5Q8N196 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX5Q8N196 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
SIX5Q8N196 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SIX5Q8N196 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX5Q8N196 SNORD31B-201ENST00000364977 69 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 RNU6-1323P-201ENST00000384025 107 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 ATP5A1P2-201ENST00000412323 255 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX5Q8N196 AC016717.1-201ENST00000448918 286 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 AC115115.1-201ENST00000449927 248 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 RPS27P1-201ENST00000450552 247 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 RNU6-1211P-201ENST00000459179 105 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 RNA5SP20-201ENST00000515976 84 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX5Q8N196 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX5Q8N196 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX5Q8N196 MIR3646-201ENST00000578301 84 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 AL359881.1-201ENST00000602916 267 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 MIR8058-201ENST00000615737 89 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 TUG1_4.1-201ENST00000619464 181 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.91□□□□□ -1.78
SIX5Q8N196 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX5Q8N196 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SIX5Q8N196 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX5Q8N196 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX5Q8N196 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX5Q8N196 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SIX5Q8N196 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.9□□□□□ -1.78
SIX5Q8N196 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SIX5Q8N196 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SIX5Q8N196 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SIX5Q8N196 AL356292.1-201ENST00000283110 373 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 RNU4-13P-201ENST00000364019 141 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 AC008134.1-201ENST00000420943 193 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX5Q8N196 AL353705.1-201ENST00000433468 480 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 AP001486.1-201ENST00000463339 476 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 AL049873.1-201ENST00000480540 376 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 RPL36AP21-201ENST00000490372 323 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX5Q8N196 ATP5EP1-201ENST00000510257 156 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 RNU6-948P-201ENST00000516374 107 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 RNA5SP164-201ENST00000516533 110 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 SCARNA11.3-201ENST00000517276 130 ntBASIC3.9□□□□□ -1.79
SIX5Q8N196 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms