Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL158147.1-201ENST00000443970 75 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 HMGN2P7-201ENST00000456186 273 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 RPS29P24-201ENST00000486345 171 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 RPL29P14-201ENST00000495837 428 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 RNU6-1337P-201ENST00000516525 95 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 RNU7-143P-201ENST00000516781 65 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 AC069240.1-201ENST00000548774 375 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 AC025627.2-201ENST00000576220 160 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 MIR4765-201ENST00000585007 77 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 MIR7702-201ENST00000621931 59 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RNF135Q8IUD6 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 RNU6-597P-201ENST00000365620 102 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 SNORA20B-201ENST00000384220 132 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 MIR548A3-201ENST00000385297 97 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 MIR300-201ENST00000401138 83 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 RNU7-57P-201ENST00000459540 60 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 AP001486.1-201ENST00000463339 476 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 SNORA70.14-201ENST00000516205 110 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 Y_RNA.677-201ENST00000516401 85 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 RNU6-1061P-201ENST00000516530 99 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 RNU6-537P-201ENST00000517277 103 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 RNA5SP179-201ENST00000517284 121 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 AC244505.7-201ENST00000599675 272 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 AC120024.3-201ENST00000603167 156 ntBASIC4.13□□□□□ -1.75
RNF135Q8IUD6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF135Q8IUD6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 AP003122.5-201ENST00000527668 3766 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 RNA5SP97-201ENST00000365006 84 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 RNY3P5-201ENST00000384127 102 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 Y_RNA.692-201ENST00000516627 105 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 AC103810.1-201ENST00000579873 453 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 MIR4753-201ENST00000585119 83 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 AP003357.1-201ENST00000604497 148 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 AC091167.4-201ENST00000605079 184 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
RNF135Q8IUD6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF135Q8IUD6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 Y_RNA.116-201ENST00000363292 103 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 RNU6-271P-201ENST00000363858 105 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 SNORD73B-201ENST00000364394 72 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 RNU6-1164P-201ENST00000364428 107 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 SNORD116-13-201ENST00000384408 92 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 HMGN2P8-201ENST00000391458 268 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 AL138878.1-201ENST00000405131 347 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 AL139247.1-201ENST00000422768 325 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 AL031737.1-201ENST00000450125 223 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 RNU7-14P-201ENST00000459331 62 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 AL133162.1-201ENST00000463228 453 ntBASIC4.11□□□□□ -1.75
RNF135Q8IUD6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF135Q8IUD6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
RNF135Q8IUD6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF135Q8IUD6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF135Q8IUD6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF135Q8IUD6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF135Q8IUD6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF135Q8IUD6 SNORA27.1-201ENST00000362604 124 ntBASIC4.1□□□□□ -1.75
RNF135Q8IUD6 U8.1-201ENST00000362843 134 ntBASIC4.1□□□□□ -1.75
RNF135Q8IUD6 Y_RNA.500-201ENST00000384466 111 ntBASIC4.1□□□□□ -1.75
RNF135Q8IUD6 RPS26P55-201ENST00000471178 356 ntBASIC4.1□□□□□ -1.75
RNF135Q8IUD6 RN7SKP18-201ENST00000516005 275 ntBASIC4.1□□□□□ -1.75
RNF135Q8IUD6 MIR449C-201ENST00000516047 92 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms