Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC005176.2-201ENST00000596933 147 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 AC090517.3-201ENST00000625170 141 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP48Q86UV5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP48Q86UV5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP48Q86UV5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP48Q86UV5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP48Q86UV5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
USP48Q86UV5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.68□□□□□ -1.82
USP48Q86UV5 AC062016.1-201ENST00000355719 319 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 RNU6-727P-201ENST00000363592 107 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 SNORA18.2-201ENST00000383865 132 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 Y_RNA.570-201ENST00000384750 101 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 RPS12P18-201ENST00000442381 270 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 AL109933.2-201ENST00000452651 260 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 Y_RNA.644-201ENST00000459006 113 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 TRBV12-1-201ENST00000479785 344 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 Y_RNA.674-201ENST00000516362 113 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 RNU6-344P-201ENST00000516635 111 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 AC018448.1-201ENST00000552843 316 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 AC091544.4-201ENST00000555268 342 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 AL137100.2-201ENST00000555786 315 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 MIR5006-201ENST00000583027 110 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 RPL17P51-201ENST00000605218 238 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 AC011921.3-201ENST00000605540 361 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 SNORA50A-202ENST00000629536 136 ntBASIC3.68□□□□□ -1.82
USP48Q86UV5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP48Q86UV5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP48Q86UV5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.68□□□□□ -1.82
USP48Q86UV5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
USP48Q86UV5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP48Q86UV5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP48Q86UV5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP48Q86UV5 Y_RNA.83-201ENST00000363005 113 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 RNU6-774P-201ENST00000363238 107 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 Y_RNA.498-201ENST00000384460 102 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USP48Q86UV5 SNORA12-201ENST00000391162 147 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 AL033519.2-201ENST00000403958 392 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 RNU4-30P-201ENST00000410245 143 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 AC009237.7-201ENST00000447357 229 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 UQCRHP3-201ENST00000451503 251 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 AL138752.1-201ENST00000452964 351 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.67□□□□□ -1.82
USP48Q86UV5 AC107393.1-201ENST00000512403 346 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 RNU6-255P-201ENST00000516957 105 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.67□□□□□ -1.82
USP48Q86UV5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.67□□□□□ -1.82
USP48Q86UV5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.67□□□□□ -1.82
USP48Q86UV5 SNORD11B-201ENST00000607707 90 ntBASIC3.67□□□□□ -1.82
USP48Q86UV5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.67□□□□□ -1.82
USP48Q86UV5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
USP48Q86UV5 SNORA68.1-201ENST00000364537 132 ntBASIC3.66□□□□□ -1.82
USP48Q86UV5 RNU6-1328P-201ENST00000410938 106 ntBASIC3.66□□□□□ -1.82
USP48Q86UV5 RNA5SP508-201ENST00000411327 119 ntBASIC3.66□□□□□ -1.82
USP48Q86UV5 AL392103.1-201ENST00000447000 198 ntBASIC3.66□□□□□ -1.82
USP48Q86UV5 RNU2-44P-201ENST00000516795 194 ntBASIC3.66□□□□□ -1.82
USP48Q86UV5 SCARNA3-201ENST00000517097 143 ntBASIC3.66□□□□□ -1.82
USP48Q86UV5 DEFB131C-201ENST00000528817 165 ntBASIC3.66□□□□□ -1.82
USP48Q86UV5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.66□□□□□ -1.82
USP48Q86UV5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.66□□□□□ -1.82
USP48Q86UV5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
USP48Q86UV5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USP48Q86UV5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
USP48Q86UV5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
USP48Q86UV5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP48Q86UV5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP48Q86UV5 Y_RNA.199-201ENST00000364014 102 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 Y_RNA.270-201ENST00000364693 104 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 RNU6-740P-201ENST00000364734 105 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 SNORA72.2-201ENST00000365028 127 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 RNU6-1175P-201ENST00000365200 107 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 RNY4P28-201ENST00000365281 93 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 U6atac.2-201ENST00000408644 118 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.65□□□□□ -1.83
USP48Q86UV5 RAB28P5-201ENST00000427490 651 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 RPL30P4-201ENST00000429309 333 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 AL121890.1-201ENST00000435457 205 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 AC104332.1-201ENST00000440471 797 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.65□□□□□ -1.83
USP48Q86UV5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.65□□□□□ -1.83
USP48Q86UV5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.65□□□□□ -1.83
USP48Q86UV5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP48Q86UV5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
USP48Q86UV5 AC008264.2-201ENST00000610193 3731 ntBASIC3.65□□□□□ -1.83
USP48Q86UV5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 MIR411-201ENST00000362239 96 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 SNORD32B-201ENST00000364460 84 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 RNU6-326P-201ENST00000365480 107 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 RNU6-1310P-201ENST00000384153 107 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 Y_RNA.446-201ENST00000384178 104 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 Y_RNA.464-201ENST00000384282 110 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 SNORA53-201ENST00000391141 249 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 RNU6-493P-201ENST00000391321 108 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 Y_RNA.597-201ENST00000410463 100 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 AC004866.1-201ENST00000411748 78 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 ELOCP21-201ENST00000412558 336 ntBASIC3.64□□□□□ -1.83
USP48Q86UV5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.64□□□□□ -1.83
USP48Q86UV5 RNU7-120P-201ENST00000459334 63 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms