Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AL357552.1-201ENST00000445254 415 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 AL358232.1-201ENST00000448030 501 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 RN7SKP179-201ENST00000516126 217 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF20Q5VTR2 MIR7851-201ENST00000610611 160 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF20Q5VTR2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF20Q5VTR2 SNORD45.3-201ENST00000363836 72 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 AP002088.1-201ENST00000382740 395 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 RNU6-1336P-201ENST00000383886 109 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 RNU6-476P-201ENST00000384726 107 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 MIR586-201ENST00000385035 97 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF20Q5VTR2 RNA5SP38-201ENST00000410750 119 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF20Q5VTR2 ARF4P2-201ENST00000430209 526 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 AL121890.1-201ENST00000435457 205 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RNF20Q5VTR2 RNU5F-4P-201ENST00000516581 114 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 RNU6-1098P-201ENST00000516772 96 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 AC090049.2-201ENST00000550377 109 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 MIR6798-201ENST00000612887 67 ntBASIC4.2□□□□□ -1.74
RNF20Q5VTR2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF20Q5VTR2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF20Q5VTR2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RNF20Q5VTR2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF20Q5VTR2 AL139095.1-201ENST00000404326 391 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 RNU6ATAC-201ENST00000408749 126 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 RN7SKP202-201ENST00000410439 330 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 YME1L1P1-201ENST00000429435 297 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 RPL23AP7-203ENST00000449021 469 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 SNRPGP8-201ENST00000454064 226 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 CENPBD1P1-201ENST00000464061 469 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 HMGN2P9-201ENST00000476875 229 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 SNORA70.19-201ENST00000516717 90 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 AC090142.3-201ENST00000519012 385 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF20Q5VTR2 AC106785.1-201ENST00000565935 262 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 POLR3GP1-201ENST00000594073 261 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 U6.98-201ENST00000637157 84 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF20Q5VTR2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RNF20Q5VTR2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF20Q5VTR2 AL161912.2-201ENST00000565707 3007 ntBASIC4.19□□□□□ -1.74
RNF20Q5VTR2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AL359837.1-201ENST00000381357 287 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 SNORA20B-201ENST00000384220 132 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 SNORD14D-201ENST00000384390 87 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 Y_RNA.587-201ENST00000391210 103 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 MIR873-201ENST00000401120 77 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 RNU4-43P-201ENST00000410628 137 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 CYCSP4-201ENST00000429682 331 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 MIR449C-201ENST00000516047 92 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 RNU1-95P-201ENST00000516357 160 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 SNORA70.18-201ENST00000516696 98 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 RNU1-128P-201ENST00000516704 160 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AC027419.1-201ENST00000522976 328 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AC120024.3-201ENST00000603167 156 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AL670379.2-201ENST00000604983 252 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AL121772.2-201ENST00000614331 297 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AL138880.2-201ENST00000616214 239 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 OTUD4P1-201ENST00000237841 3067 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 AC058791.1-201ENST00000608412 3198 ntBASIC4.18□□□□□ -1.74
RNF20Q5VTR2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF20Q5VTR2 RNY3P5-201ENST00000384127 102 ntBASIC4.17□□□□□ -1.74
RNF20Q5VTR2 RPL23AP67-201ENST00000465341 474 ntBASIC4.17□□□□□ -1.74
RNF20Q5VTR2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF20Q5VTR2 MTND5P34-201ENST00000568888 325 ntBASIC4.17□□□□□ -1.74
RNF20Q5VTR2 AP003357.1-201ENST00000604497 148 ntBASIC4.17□□□□□ -1.74
RNF20Q5VTR2 U4.6-201ENST00000621618 127 ntBASIC4.17□□□□□ -1.74
RNF20Q5VTR2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF20Q5VTR2 CENPCP1-201ENST00000533085 2578 ntBASIC4.17□□□□□ -1.74
RNF20Q5VTR2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF20Q5VTR2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF20Q5VTR2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF20Q5VTR2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF20Q5VTR2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
RNF20Q5VTR2 Y_RNA.584-201ENST00000391090 114 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 RNA5SP252-201ENST00000391131 119 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 SNORA79-201ENST00000408376 140 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF20Q5VTR2 DBIP2-201ENST00000419076 262 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 RNU7-57P-201ENST00000459540 60 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 RPL23AP54-201ENST00000495129 419 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 CYCTP-201ENST00000504253 315 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 AC093331.1-201ENST00000521474 169 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 AC079598.5-201ENST00000547460 117 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF20Q5VTR2 AC127455.1-201ENST00000565496 145 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 MIR3186-201ENST00000577404 85 ntBASIC4.16□□□□□ -1.74
RNF20Q5VTR2 MIR378D2-201ENST00000580636 98 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms