Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.63□□□□□ -1.67
VARS2Q5ST30 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.63□□□□□ -1.67
VARS2Q5ST30 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 snoU2_19.1-201ENST00000362361 80 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 RNU6-655P-201ENST00000362858 107 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 SNORD32B-201ENST00000364460 84 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 Y_RNA.440-201ENST00000384120 114 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 RNU6-748P-201ENST00000384648 107 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 MIR493-201ENST00000385254 89 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 AC099677.2-201ENST00000436385 175 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 AC016717.1-201ENST00000448918 286 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 RPL30P14-201ENST00000482744 348 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 RNA5SP49-201ENST00000516450 115 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 RNU6-1096P-201ENST00000517089 102 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 TVP23BP1-201ENST00000557500 617 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 AC140658.3-201ENST00000567603 271 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 MIR4778-201ENST00000577635 80 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 HSPE1P19-201ENST00000603327 295 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 AC096720.1-201ENST00000604441 183 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 AL160290.3-201ENST00000604869 165 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 MIR3199-2-201ENST00000636243 86 ntBASIC4.63□□□□□ -1.67
VARS2Q5ST30 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.63□□□□□ -1.67
VARS2Q5ST30 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.63□□□□□ -1.67
VARS2Q5ST30 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VARS2Q5ST30 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.62□□□□□ -1.67
VARS2Q5ST30 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VARS2Q5ST30 RNA5SP175-201ENST00000364275 119 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 Y_RNA.253-201ENST00000364562 112 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VARS2Q5ST30 MIR548O-201ENST00000408583 114 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 AC023141.12-201ENST00000512399 199 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VARS2Q5ST30 MIR4438-201ENST00000585271 93 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 AC087685.1-201ENST00000587507 141 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 AC008739.3-201ENST00000603262 127 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 AC103810.7-201ENST00000607821 91 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 AL359075.3-201ENST00000613288 217 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 AC009487.4-201ENST00000624969 3585 ntBASIC4.62□□□□□ -1.67
VARS2Q5ST30 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VARS2Q5ST30 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VARS2Q5ST30 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VARS2Q5ST30 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
VARS2Q5ST30 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VARS2Q5ST30 RNA5SP307-201ENST00000362863 116 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 CRYBB2P1-203ENST00000415709 538 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 AC016909.1-201ENST00000415916 166 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 AL157831.1-201ENST00000426134 473 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 RPS29P21-201ENST00000496272 170 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.61□□□□□ -1.67
VARS2Q5ST30 AC004812.1-201ENST00000540773 146 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 HIGD1AP1-201ENST00000550979 275 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.61□□□□□ -1.67
VARS2Q5ST30 AC012493.2-201ENST00000595083 291 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 MIR8059-201ENST00000620427 81 ntBASIC4.61□□□□□ -1.67
VARS2Q5ST30 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.61□□□□□ -1.67
VARS2Q5ST30 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.6□□□□□ -1.67
VARS2Q5ST30 Y_RNA.37-201ENST00000362606 108 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 RNU1-14P-201ENST00000362759 152 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 RNU4-16P-201ENST00000364737 141 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 RNA5SP283-201ENST00000365604 119 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 MIR708-201ENST00000390708 88 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 RNA5SP144-201ENST00000410846 116 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 Y_RNA.621-201ENST00000411065 96 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 SNORA74C-2-201ENST00000411179 201 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 AL512326.2-201ENST00000426359 151 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 RNA5SP519-201ENST00000516480 119 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 SNORD36C-201ENST00000516733 66 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.6□□□□□ -1.67
VARS2Q5ST30 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 AL110115.1-201ENST00000614396 364 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 AC091932.4-201ENST00000623386 200 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VARS2Q5ST30 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VARS2Q5ST30 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.6□□□□□ -1.67
VARS2Q5ST30 MAPK10-303ENST00000641324 3959 ntBASIC4.6□□□□□ -1.67
VARS2Q5ST30 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
VARS2Q5ST30 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
VARS2Q5ST30 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
VARS2Q5ST30 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.59□□□□□ -1.67
VARS2Q5ST30 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.59□□□□□ -1.67
VARS2Q5ST30 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VARS2Q5ST30 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.59□□□□□ -1.67
VARS2Q5ST30 SNORA71.3-201ENST00000362582 128 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 RNU6-1181P-201ENST00000384191 106 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 MIR200C-201ENST00000384980 68 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 MIR519C-201ENST00000385053 87 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 SNORA40.18-201ENST00000391200 128 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 RNU7-14P-201ENST00000459331 62 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 RNU7-80P-201ENST00000459562 61 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 SCGB1D5P-201ENST00000515134 247 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 MIR4286-201ENST00000580651 93 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.59□□□□□ -1.67
VARS2Q5ST30 AC008739.2-201ENST00000597006 317 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms