Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU6-271P-201ENST00000363858 105 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 RNU6-215P-201ENST00000365169 102 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 RNU6-768P-201ENST00000384683 107 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 RNU6ATAC-201ENST00000408749 126 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDH1Q08174 MIR449C-201ENST00000516047 92 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH1Q08174 AP003357.1-201ENST00000604497 148 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 RNVU1-4-201ENST00000612985 164 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDH1Q08174 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH1Q08174 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PCDH1Q08174 MIR6844-201ENST00000637122 62 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH1Q08174 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDH1Q08174 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH1Q08174 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PCDH1Q08174 SNORA27.1-201ENST00000362604 124 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 RNY3P5-201ENST00000384127 102 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 SNORD116-13-201ENST00000384408 92 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 Y_RNA.521-201ENST00000384560 114 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 MIR1294-201ENST00000408503 142 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 RPS29P31-201ENST00000446147 164 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 AL358232.1-201ENST00000448030 501 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 RPS27P1-201ENST00000450552 247 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 AC092991.1-201ENST00000477176 376 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 RNA5SP112-201ENST00000515937 99 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.54□□□□□ -1.84
PCDH1Q08174 RMST_8.1-201ENST00000610287 165 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 snoZ196.1-201ENST00000625269 89 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 U6.98-201ENST00000637157 84 ntBASIC3.54□□□□□ -1.84
PCDH1Q08174 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH1Q08174 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH1Q08174 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH1Q08174 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
PCDH1Q08174 AP003122.5-201ENST00000527668 3766 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDH1Q08174 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH1Q08174 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDH1Q08174 RNA5SP295-201ENST00000362655 121 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 Y_RNA.393-201ENST00000383936 102 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 RNU6-1323P-201ENST00000384025 107 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 RNU6-80P-201ENST00000384195 107 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 SNORD14D-201ENST00000384390 87 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 RNU4-43P-201ENST00000410628 137 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 SNORA57.3-201ENST00000411095 141 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDH1Q08174 RPS26P55-201ENST00000471178 356 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 RPS27P26-201ENST00000494583 239 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 AC127455.1-201ENST00000565496 145 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 AC006130.2-201ENST00000586202 326 ntBASIC3.53□□□□□ -1.84
PCDH1Q08174 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH1Q08174 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH1Q08174 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH1Q08174 MFSD8-233ENST00000641482 4860 ntBASIC3.53□□□□□ -1.85
PCDH1Q08174 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
PCDH1Q08174 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCDH1Q08174 MIR200C-201ENST00000384980 68 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 RNU6-460P-201ENST00000391158 108 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 RNA5SP354-201ENST00000391247 136 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 PTMAP2-201ENST00000397627 327 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 RN7SKP156-201ENST00000410308 342 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.52□□□□□ -1.85
PCDH1Q08174 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCDH1Q08174 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDH1Q08174 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDH1Q08174 SNORD65B-201ENST00000459126 73 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 RNU6-221P-201ENST00000459541 99 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 RPL36AP21-201ENST00000490372 323 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 AC010598.1-201ENST00000510378 103 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDH1Q08174 MIR4738-201ENST00000579134 87 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDH1Q08174 POLR3GP1-201ENST00000594073 261 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 AC011603.4-201ENST00000611325 277 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 CR392039.5-201ENST00000623201 510 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PCDH1Q08174 MFSD8-236ENST00000641509 4050 ntBASIC3.52□□□□□ -1.85
PCDH1Q08174 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
PCDH1Q08174 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDH1Q08174 RNU6-234P-201ENST00000365229 104 ntBASIC3.51□□□□□ -1.85
PCDH1Q08174 RNU6-1083P-201ENST00000384022 107 ntBASIC3.51□□□□□ -1.85
PCDH1Q08174 RNU6-975P-201ENST00000384296 105 ntBASIC3.51□□□□□ -1.85
PCDH1Q08174 AC009414.1-201ENST00000427200 443 ntBASIC3.51□□□□□ -1.85
PCDH1Q08174 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDH1Q08174 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH1Q08174 RNU7-116P-201ENST00000516940 62 ntBASIC3.51□□□□□ -1.85
PCDH1Q08174 AC008011.1-201ENST00000545989 227 ntBASIC3.51□□□□□ -1.85
PCDH1Q08174 AC008739.3-201ENST00000603262 127 ntBASIC3.51□□□□□ -1.85
PCDH1Q08174 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PCDH1Q08174 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH1Q08174 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
PCDH1Q08174 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
PCDH1Q08174 RNU6-486P-201ENST00000363116 107 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 RNU6-1180P-201ENST00000364935 107 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 RNU6-1274P-201ENST00000384557 107 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 U8.11-201ENST00000384699 133 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 RNA5SP171-201ENST00000391071 115 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 RNU6-57P-201ENST00000411348 103 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms