Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 AL390729.2-201ENST00000416137 156 ntBASIC3.85□□□□□ -1.79
XPCQ01831 UBL5P3-201ENST00000475112 231 ntBASIC3.85□□□□□ -1.79
XPCQ01831 AC107016.2-201ENST00000547968 190 ntBASIC3.85□□□□□ -1.79
XPCQ01831 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.85□□□□□ -1.79
XPCQ01831 AC127459.3-201ENST00000624328 466 ntBASIC3.85□□□□□ -1.79
XPCQ01831 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.85□□□□□ -1.79
XPCQ01831 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.85□□□□□ -1.79
XPCQ01831 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
XPCQ01831 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
XPCQ01831 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
XPCQ01831 U8.2-201ENST00000363156 134 ntBASIC3.84□□□□□ -1.79
XPCQ01831 RPL21P3-201ENST00000395517 478 ntBASIC3.84□□□□□ -1.79
XPCQ01831 AL603910.2-201ENST00000407268 136 ntBASIC3.84□□□□□ -1.79
XPCQ01831 AC146507.2-201ENST00000460608 476 ntBASIC3.84□□□□□ -1.79
XPCQ01831 HMGB3P17-201ENST00000504195 649 ntBASIC3.84□□□□□ -1.79
XPCQ01831 SERF1AP1-201ENST00000514575 187 ntBASIC3.84□□□□□ -1.79
XPCQ01831 RNU6-111P-201ENST00000517179 105 ntBASIC3.84□□□□□ -1.79
XPCQ01831 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.84□□□□□ -1.79
XPCQ01831 AC055872.1-201ENST00000570978 278 ntBASIC3.84□□□□□ -1.79
XPCQ01831 MIR5006-201ENST00000583027 110 ntBASIC3.84□□□□□ -1.79
XPCQ01831 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.84□□□□□ -1.79
XPCQ01831 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.84□□□□□ -1.8
XPCQ01831 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
XPCQ01831 AC093831.2-201ENST00000624393 3427 ntBASIC3.83□□□□□ -1.8
XPCQ01831 MIR504-201ENST00000385065 83 ntBASIC3.83□□□□□ -1.8
XPCQ01831 RAB28P5-201ENST00000427490 651 ntBASIC3.83□□□□□ -1.8
XPCQ01831 AC140059.1-201ENST00000489238 361 ntBASIC3.83□□□□□ -1.8
XPCQ01831 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.83□□□□□ -1.8
XPCQ01831 RNU2-44P-201ENST00000516795 194 ntBASIC3.83□□□□□ -1.8
XPCQ01831 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.83□□□□□ -1.8
XPCQ01831 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.83□□□□□ -1.8
XPCQ01831 MIR7515-201ENST00000637837 67 ntBASIC3.83□□□□□ -1.8
XPCQ01831 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
XPCQ01831 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
XPCQ01831 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
XPCQ01831 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.82□□□□□ -1.8
XPCQ01831 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.82□□□□□ -1.8
XPCQ01831 Y_RNA.54-201ENST00000362766 105 ntBASIC3.82□□□□□ -1.8
XPCQ01831 Y_RNA.415-201ENST00000384012 112 ntBASIC3.82□□□□□ -1.8
XPCQ01831 Y_RNA.539-201ENST00000384635 107 ntBASIC3.82□□□□□ -1.8
XPCQ01831 MIR29B2-201ENST00000385055 81 ntBASIC3.82□□□□□ -1.8
XPCQ01831 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.82□□□□□ -1.8
XPCQ01831 RNU6-1328P-201ENST00000410938 106 ntBASIC3.82□□□□□ -1.8
XPCQ01831 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.82□□□□□ -1.8
XPCQ01831 RNU6-344P-201ENST00000516635 111 ntBASIC3.82□□□□□ -1.8
XPCQ01831 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.82□□□□□ -1.8
XPCQ01831 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.82□□□□□ -1.8
XPCQ01831 AC090517.3-201ENST00000625170 141 ntBASIC3.82□□□□□ -1.8
XPCQ01831 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
XPCQ01831 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
XPCQ01831 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
XPCQ01831 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
XPCQ01831 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
XPCQ01831 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
XPCQ01831 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
XPCQ01831 RNA5SP289-201ENST00000362332 137 ntBASIC3.81□□□□□ -1.8
XPCQ01831 SNORA72.2-201ENST00000365028 127 ntBASIC3.81□□□□□ -1.8
XPCQ01831 Y_RNA.331-201ENST00000365267 102 ntBASIC3.81□□□□□ -1.8
XPCQ01831 Y_RNA.569-201ENST00000384749 103 ntBASIC3.81□□□□□ -1.8
XPCQ01831 MIR9-1-201ENST00000385198 89 ntBASIC3.81□□□□□ -1.8
XPCQ01831 MT-TR-201ENST00000387439 65 ntBASIC3.81□□□□□ -1.8
XPCQ01831 SNORA53-201ENST00000391141 249 ntBASIC3.81□□□□□ -1.8
XPCQ01831 RPL23AP36-201ENST00000413895 458 ntBASIC3.81□□□□□ -1.8
XPCQ01831 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.81□□□□□ -1.8
XPCQ01831 AC009237.7-201ENST00000447357 229 ntBASIC3.81□□□□□ -1.8
XPCQ01831 RN7SL75P-201ENST00000461926 281 ntBASIC3.81□□□□□ -1.8
XPCQ01831 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.81□□□□□ -1.8
XPCQ01831 AC008749.1-201ENST00000597650 306 ntBASIC3.81□□□□□ -1.8
XPCQ01831 AC022441.3-201ENST00000605737 136 ntBASIC3.81□□□□□ -1.8
XPCQ01831 SNORD11B-201ENST00000607707 90 ntBASIC3.81□□□□□ -1.8
XPCQ01831 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
XPCQ01831 AC008264.2-201ENST00000610193 3731 ntBASIC3.81□□□□□ -1.8
XPCQ01831 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
XPCQ01831 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XPCQ01831 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.8□□□□□ -1.8
XPCQ01831 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
XPCQ01831 RNU6-1266P-201ENST00000362794 105 ntBASIC3.8□□□□□ -1.8
XPCQ01831 SNORD114-30-201ENST00000364448 72 ntBASIC3.8□□□□□ -1.8
XPCQ01831 SNORD32B-201ENST00000364460 84 ntBASIC3.8□□□□□ -1.8
XPCQ01831 RNU6-326P-201ENST00000365480 107 ntBASIC3.8□□□□□ -1.8
XPCQ01831 RNU6-338P-201ENST00000383888 105 ntBASIC3.8□□□□□ -1.8
XPCQ01831 Y_RNA.515-201ENST00000384535 112 ntBASIC3.8□□□□□ -1.8
XPCQ01831 RNA5SP21-201ENST00000410917 96 ntBASIC3.8□□□□□ -1.8
XPCQ01831 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.8□□□□□ -1.8
XPCQ01831 RNU2-31P-201ENST00000516954 155 ntBASIC3.8□□□□□ -1.8
XPCQ01831 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.8□□□□□ -1.8
XPCQ01831 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.8□□□□□ -1.8
XPCQ01831 AL442067.1-201ENST00000613261 223 ntBASIC3.8□□□□□ -1.8
XPCQ01831 AC004467.1-201ENST00000615678 330 ntBASIC3.8□□□□□ -1.8
XPCQ01831 AC006001.4-201ENST00000622243 395 ntBASIC3.8□□□□□ -1.8
XPCQ01831 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
XPCQ01831 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
XPCQ01831 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.8□□□□□ -1.8
XPCQ01831 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
XPCQ01831 AC135776.4-201ENST00000624300 1904 ntBASIC3.8□□□□□ -1.8
XPCQ01831 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
XPCQ01831 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
XPCQ01831 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.79□□□□□ -1.8
XPCQ01831 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
XPCQ01831 RNU1-72P-201ENST00000362976 153 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms