Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-879P-201ENST00000364328 108 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 SNORD31B-201ENST00000364977 69 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 RNU6-793P-201ENST00000384233 104 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 MIR300-201ENST00000401138 83 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 RNU6-1001P-201ENST00000411265 100 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 AC096644.2-201ENST00000429278 159 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN20P56880 HMGN2P18-201ENST00000450680 270 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.11□□□□□ -2.07
CLDN20P56880 SNORA4.4-201ENST00000515921 135 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 SNORA40.14-201ENST00000516543 86 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.11□□□□□ -2.07
CLDN20P56880 GNAI2P1-201ENST00000541815 315 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 AP002770.2-201ENST00000543613 532 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 AC006600.1-201ENST00000572529 153 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 SNORD53-201ENST00000579969 78 ntBASIC2.11□□□□□ -2.07
CLDN20P56880 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLDN20P56880 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN20P56880 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN20P56880 Y_RNA.148-201ENST00000363557 117 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 RNU6-438P-201ENST00000365561 103 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 SNORA22B-201ENST00000383876 138 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 RNU1-52P-201ENST00000384190 164 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 RNU6-301P-201ENST00000384277 107 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 MIR329-1-201ENST00000385028 80 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CLDN20P56880 SRIP3-201ENST00000413200 219 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 MTCO3P19-201ENST00000415864 321 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN20P56880 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN20P56880 AC007395.1-201ENST00000451333 677 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 PRELID3BP1-201ENST00000457142 540 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 AC091179.3-201ENST00000474761 144 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 HMGB3P3-201ENST00000510526 400 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN20P56880 RNU6-991P-201ENST00000516168 107 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 Y_RNA.683-201ENST00000516508 93 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 RN7SKP49-201ENST00000516675 260 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 CYCSP23-201ENST00000519781 313 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 AL442163.3-201ENST00000554110 156 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 AC091544.4-201ENST00000555268 342 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 MIR5188-201ENST00000583467 113 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN20P56880 AL590808.1-201ENST00000618696 141 ntBASIC2.1□□□□□ -2.07
CLDN20P56880 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
CLDN20P56880 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLDN20P56880 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLDN20P56880 Y_RNA.202-201ENST00000364083 110 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC117470.1-201ENST00000381974 330 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 RNU6-1145P-201ENST00000384246 107 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 RNU6-318P-201ENST00000384283 103 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 RNY3P4-201ENST00000384428 101 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 SNORA11.2-201ENST00000408318 127 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 EDDM3CP-201ENST00000415977 425 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN20P56880 AL160004.2-201ENST00000432935 350 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 RPS15AP28-201ENST00000435088 386 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC010095.1-201ENST00000443543 144 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 IFNA11P-201ENST00000446352 526 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AL137159.1-201ENST00000452808 512 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AL139109.1-201ENST00000455491 297 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC016925.1-201ENST00000458303 298 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC093259.1-201ENST00000509755 300 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.09□□□□□ -2.07
CLDN20P56880 RRN3P3-201ENST00000549207 578 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AL442663.2-201ENST00000554385 511 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 HSBP1P1-201ENST00000555205 166 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN20P56880 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN20P56880 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.09□□□□□ -2.07
CLDN20P56880 MIR3126-201ENST00000577443 74 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC026271.5-201ENST00000577873 130 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 MIR5694-201ENST00000581190 76 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 SNORD58B-201ENST00000607313 66 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC008873.1-201ENST00000625051 138 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC068205.3-201ENST00000636385 468 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CLDN20P56880 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
CLDN20P56880 AC005592.1-201ENST00000566527 1640 ntBASIC2.09□□□□□ -2.08
CLDN20P56880 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CLDN20P56880 MTND5P35-201ENST00000557537 1720 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN20P56880 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN20P56880 Y_RNA.27-201ENST00000362540 103 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 RNA5SP361-201ENST00000362686 118 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 Y_RNA.80-201ENST00000362996 102 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 RNU1-91P-201ENST00000364746 163 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 Y_RNA.332-201ENST00000365271 113 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 SNORA67.2-201ENST00000384300 149 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 MIR586-201ENST00000385035 97 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 MIR524-201ENST00000385242 87 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms