Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.86□□□□□ -2.27
CLDN18P56856 RNU7-180P-201ENST00000459240 63 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 SNORA31.4-201ENST00000516049 129 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 SCARNA16.2-201ENST00000516520 172 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 RN7SKP287-201ENST00000516546 266 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 RNU6-113P-201ENST00000516653 101 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 AC087854.1-201ENST00000519706 414 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 MRPS36P4-201ENST00000534436 298 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
CLDN18P56856 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.86□□□□□ -2.27
CLDN18P56856 AC040904.1-201ENST00000590850 223 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 AP001596.2-201ENST00000608410 312 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 AC064836.2-201ENST00000609491 462 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 HULC.1-201ENST00000612720 240 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 AL354950.2-201ENST00000617939 290 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 snoZ196.1-201ENST00000625269 89 ntBASIC0.86□□□□□ -2.27
CLDN18P56856 RNU6-1240P-201ENST00000365155 104 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 MIR518E-201ENST00000385252 88 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 RNU6-910P-201ENST00000390844 107 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 SNORD37.1-201ENST00000390968 65 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 RNU6-1186P-201ENST00000410429 97 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 RPS27P1-201ENST00000450552 247 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 RNU6-922P-201ENST00000516753 99 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 RNU6-165P-201ENST00000517170 99 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.85□□□□□ -2.27
CLDN18P56856 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN18P56856 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN18P56856 AC025423.5-201ENST00000550230 219 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN18P56856 AC068790.6-201ENST00000602558 258 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN18P56856 AC106754.2-201ENST00000623006 233 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 FER-210ENST00000628534 558 ntTSL 5 BASIC0.85□□□□□ -2.27
CLDN18P56856 AL391516.1-201ENST00000554380 2449 ntBASIC0.85□□□□□ -2.27
CLDN18P56856 ZNF204P-201ENST00000416749 2397 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 AC004866.1-201ENST00000411748 78 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 CDK8P2-201ENST00000415020 547 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 AC245047.3-201ENST00000429428 127 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 AL606517.2-201ENST00000442855 241 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.84□□□□□ -2.27
CLDN18P56856 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.84□□□□□ -2.27
CLDN18P56856 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.84□□□□□ -2.27
CLDN18P56856 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CLDN18P56856 FGF7P1-201ENST00000582820 288 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 AL357078.3-201ENST00000607528 618 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 AL603755.1-201ENST00000619504 163 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 SNORD3E-202ENST00000627253 216 ntBASIC0.84□□□□□ -2.27
CLDN18P56856 AC027514.1-201ENST00000588561 1603 ntBASIC0.84□□□□□ -2.28
CLDN18P56856 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CLDN18P56856 Y_RNA.116-201ENST00000363292 103 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 MIR520E-201ENST00000384867 87 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 MIR521-1-201ENST00000384902 87 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 AL034345.1-201ENST00000407768 123 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.83□□□□□ -2.28
CLDN18P56856 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.83□□□□□ -2.28
CLDN18P56856 TPTE2P5-203ENST00000458118 728 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 AC092991.1-201ENST00000477176 376 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 RNU6-189P-201ENST00000516120 101 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 RNU6-947P-201ENST00000516264 106 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 SNORA31.10-201ENST00000516482 106 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 AC025647.1-201ENST00000517879 253 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 MTND1P35-201ENST00000526739 508 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CLDN18P56856 MTND1P24-201ENST00000552175 861 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 AC008088.1-201ENST00000580993 280 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 FAM106DP-201ENST00000586416 501 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.83□□□□□ -2.28
CLDN18P56856 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 AC137590.2-201ENST00000619709 240 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 MIR8054-201ENST00000620877 86 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 SCARNA4-201ENST00000629045 128 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 OR5AK4P-201ENST00000635912 903 ntBASIC0.83□□□□□ -2.28
CLDN18P56856 Y_RNA.269-201ENST00000364685 89 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 RNU6-933P-201ENST00000384424 107 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 RNU6-440P-201ENST00000390882 105 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLDN18P56856 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.82□□□□□ -2.28
CLDN18P56856 AC013410.2-201ENST00000422627 201 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 RAB28P5-201ENST00000427490 651 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.82□□□□□ -2.28
CLDN18P56856 AC005002.2-201ENST00000438228 269 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 AC073415.1-201ENST00000449240 153 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 AC007215.1-201ENST00000464893 276 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 HMGB1P29-201ENST00000505659 499 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 RNU6-430P-201ENST00000517078 107 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 AL513534.2-201ENST00000603836 250 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 AC024933.1-201ENST00000608472 348 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 AC109347.2-201ENST00000610220 349 ntBASIC0.82□□□□□ -2.28
CLDN18P56856 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLDN18P56856 AC018630.2-201ENST00000534866 2403 ntBASIC0.81□□□□□ -2.28
CLDN18P56856 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
CLDN18P56856 RNU4-79P-201ENST00000362764 141 ntBASIC0.81□□□□□ -2.28
CLDN18P56856 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms