Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR1248-201ENST00000629190 106 ntBASIC3.07□□□□□ -1.92
GFRA1P56159 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
GFRA1P56159 SNORD114-7-201ENST00000362520 77 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 RNU6-271P-201ENST00000363858 105 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 RNU6-801P-201ENST00000364087 105 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 Y_RNA.368-201ENST00000365547 113 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 Y_RNA.464-201ENST00000384282 110 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 RNU6-918P-201ENST00000391219 106 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 AC006539.3-201ENST00000454258 129 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
GFRA1P56159 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
GFRA1P56159 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.06□□□□□ -1.92
GFRA1P56159 Y_RNA.662-201ENST00000516028 97 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.06□□□□□ -1.92
GFRA1P56159 MIR5047-201ENST00000579212 100 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 AC025754.2-201ENST00000606491 432 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 AC099778.2-201ENST00000610904 211 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 AC096577.2-201ENST00000611455 153 ntBASIC3.06□□□□□ -1.92
GFRA1P56159 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.06□□□□□ -1.92
GFRA1P56159 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.06□□□□□ -1.92
GFRA1P56159 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.06□□□□□ -1.92
GFRA1P56159 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
GFRA1P56159 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
GFRA1P56159 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GFRA1P56159 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
GFRA1P56159 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GFRA1P56159 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
GFRA1P56159 RNU6-653P-201ENST00000363074 106 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 Y_RNA.435-201ENST00000384095 112 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 SNORA72.4-201ENST00000384174 132 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 RNU6-1235P-201ENST00000384559 107 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 MIR873-201ENST00000401120 77 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.05□□□□□ -1.92
GFRA1P56159 AC002075.2-201ENST00000425207 252 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 AC005326.1-201ENST00000429197 123 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 AL135790.2-201ENST00000437701 267 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 AC016717.1-201ENST00000448918 286 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 HMGN2P18-201ENST00000450680 270 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 RNU6-498P-201ENST00000459468 107 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.05□□□□□ -1.92
GFRA1P56159 HMGB3P3-201ENST00000510526 400 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 PHBP14-201ENST00000512887 367 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 RNU2-34P-201ENST00000516534 121 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 AL355297.2-201ENST00000604792 129 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GFRA1P56159 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
GFRA1P56159 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
GFRA1P56159 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GFRA1P56159 AL513302.2-201ENST00000562313 1842 ntBASIC3.05□□□□□ -1.92
GFRA1P56159 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
GFRA1P56159 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
GFRA1P56159 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
GFRA1P56159 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GFRA1P56159 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.04□□□□□ -1.92
GFRA1P56159 AL159152.1-201ENST00000635019 2587 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GFRA1P56159 RNU1-23P-201ENST00000363361 144 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 RNU6-743P-201ENST00000364151 106 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 RNA5SP387-201ENST00000364226 106 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 RNU4-17P-201ENST00000365598 141 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 SNORA20B-201ENST00000384220 132 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 SNORA26.5-201ENST00000391215 123 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 AC008134.1-201ENST00000420943 193 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 MTND2P29-201ENST00000438595 412 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 RPS4XP2-201ENST00000458402 793 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 U8.19-201ENST00000459095 133 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.04□□□□□ -1.92
GFRA1P56159 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.04□□□□□ -1.92
GFRA1P56159 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.04□□□□□ -1.92
GFRA1P56159 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.04□□□□□ -1.92
GFRA1P56159 MIR4308-201ENST00000580634 81 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 MIR4276-201ENST00000584832 70 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.04□□□□□ -1.92
GFRA1P56159 AC013412.1-201ENST00000610687 192 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 AC013791.1-201ENST00000616619 62 ntBASIC3.04□□□□□ -1.92
GFRA1P56159 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.04□□□□□ -1.92
GFRA1P56159 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GFRA1P56159 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GFRA1P56159 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA1P56159 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
GFRA1P56159 Z83843.1-201ENST00000604070 3685 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA1P56159 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
GFRA1P56159 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.03□□□□□ -1.92
GFRA1P56159 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA1P56159 RNU6-899P-201ENST00000363947 107 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 RNU6-461P-201ENST00000364195 107 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 RNU6-418P-201ENST00000384035 107 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 RNU6-220P-201ENST00000390919 107 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 MTCO2P33-201ENST00000402100 465 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 AL355796.1-201ENST00000406706 323 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 RNA5SP120-201ENST00000410900 112 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 AL513477.1-202ENST00000417061 214 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 AL121890.1-201ENST00000435457 205 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.03□□□□□ -1.92
GFRA1P56159 RPL23AP7-203ENST00000449021 469 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms