Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Y_RNA.428-201ENST00000384078 102 ntBASIC2.02□□□□□ -2.09
CDH11P55287 RNU6-541P-201ENST00000384709 110 ntBASIC2.02□□□□□ -2.09
CDH11P55287 MIR625-201ENST00000385047 85 ntBASIC2.02□□□□□ -2.09
CDH11P55287 SNORA69.1-201ENST00000390904 137 ntBASIC2.02□□□□□ -2.09
CDH11P55287 U3.40-201ENST00000408706 208 ntBASIC2.02□□□□□ -2.09
CDH11P55287 RNA5SP504-201ENST00000410676 117 ntBASIC2.02□□□□□ -2.09
CDH11P55287 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.02□□□□□ -2.09
CDH11P55287 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH11P55287 MTCO2P12-201ENST00000427426 682 ntBASIC2.02□□□□□ -2.09
CDH11P55287 USP9YP16-201ENST00000430287 407 ntBASIC2.02□□□□□ -2.09
CDH11P55287 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.02□□□□□ -2.09
CDH11P55287 AL445305.1-201ENST00000432577 575 ntBASIC2.02□□□□□ -2.09
CDH11P55287 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDH11P55287 AC009238.1-201ENST00000442165 424 ntBASIC2.02□□□□□ -2.09
CDH11P55287 AC009237.6-201ENST00000446969 424 ntBASIC2.02□□□□□ -2.09
CDH11P55287 AC009237.7-201ENST00000447357 229 ntBASIC2.02□□□□□ -2.09
CDH11P55287 USP9YP23-201ENST00000455085 407 ntBASIC2.02□□□□□ -2.09
CDH11P55287 Y_RNA.631-201ENST00000459607 101 ntBASIC2.02□□□□□ -2.09
CDH11P55287 YWHAEP4-201ENST00000505390 198 ntBASIC2.02□□□□□ -2.09
CDH11P55287 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH11P55287 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH11P55287 RNU7-4P-201ENST00000516961 62 ntBASIC2.02□□□□□ -2.09
CDH11P55287 SNORD116.3-201ENST00000517176 78 ntBASIC2.02□□□□□ -2.09
CDH11P55287 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.02□□□□□ -2.09
CDH11P55287 AC104984.5-201ENST00000586878 94 ntBASIC2.02□□□□□ -2.09
CDH11P55287 SNRPGP20-201ENST00000604477 205 ntBASIC2.02□□□□□ -2.09
CDH11P55287 SNORD58B-201ENST00000607313 66 ntBASIC2.02□□□□□ -2.09
CDH11P55287 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.02□□□□□ -2.09
CDH11P55287 MIR4272-201ENST00000635924 64 ntBASIC2.02□□□□□ -2.09
CDH11P55287 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CDH11P55287 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CDH11P55287 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.02□□□□□ -2.09
CDH11P55287 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDH11P55287 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDH11P55287 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH11P55287 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDH11P55287 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDH11P55287 Y_RNA.132-201ENST00000363421 102 ntBASIC2.01□□□□□ -2.09
CDH11P55287 RNU6-1227P-201ENST00000383981 107 ntBASIC2.01□□□□□ -2.09
CDH11P55287 RN7SKP223-201ENST00000410582 62 ntBASIC2.01□□□□□ -2.09
CDH11P55287 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDH11P55287 AL121890.1-201ENST00000435457 205 ntBASIC2.01□□□□□ -2.09
CDH11P55287 IPO7P1-201ENST00000442031 636 ntBASIC2.01□□□□□ -2.09
CDH11P55287 MTND4P19-201ENST00000446659 478 ntBASIC2.01□□□□□ -2.09
CDH11P55287 HMGN2P18-201ENST00000450680 270 ntBASIC2.01□□□□□ -2.09
CDH11P55287 AL139109.1-201ENST00000455491 297 ntBASIC2.01□□□□□ -2.09
CDH11P55287 SNORA25.14-201ENST00000516481 132 ntBASIC2.01□□□□□ -2.09
CDH11P55287 RNU6-911P-201ENST00000516523 104 ntBASIC2.01□□□□□ -2.09
CDH11P55287 RNU6-344P-201ENST00000516635 111 ntBASIC2.01□□□□□ -2.09
CDH11P55287 Y_RNA.711-201ENST00000516993 102 ntBASIC2.01□□□□□ -2.09
CDH11P55287 MIR3124-201ENST00000582636 67 ntBASIC2.01□□□□□ -2.09
CDH11P55287 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH11P55287 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH11P55287 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.01□□□□□ -2.09
CDH11P55287 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2□□□□□ -2.09
CDH11P55287 RNU6-1301P-201ENST00000362724 104 ntBASIC2□□□□□ -2.09
CDH11P55287 Y_RNA.314-201ENST00000365114 102 ntBASIC2□□□□□ -2.09
CDH11P55287 Y_RNA.332-201ENST00000365271 113 ntBASIC2□□□□□ -2.09
CDH11P55287 Y_RNA.445-201ENST00000384168 102 ntBASIC2□□□□□ -2.09
CDH11P55287 RNU6-1145P-201ENST00000384246 107 ntBASIC2□□□□□ -2.09
CDH11P55287 RNU6-318P-201ENST00000384283 103 ntBASIC2□□□□□ -2.09
CDH11P55287 MIR329-1-201ENST00000385028 80 ntBASIC2□□□□□ -2.09
CDH11P55287 RNU6-308P-201ENST00000390957 107 ntBASIC2□□□□□ -2.09
CDH11P55287 MIR548P-201ENST00000408336 84 ntBASIC2□□□□□ -2.09
CDH11P55287 MCFD2P1-201ENST00000417812 300 ntBASIC2□□□□□ -2.09
CDH11P55287 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2□□□□□ -2.09
CDH11P55287 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2□□□□□ -2.09
CDH11P55287 RNU7-87P-201ENST00000459343 62 ntBASIC2□□□□□ -2.09
CDH11P55287 RPS23P5-201ENST00000495419 428 ntBASIC2□□□□□ -2.09
CDH11P55287 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
CDH11P55287 RPS29P21-201ENST00000496272 170 ntBASIC2□□□□□ -2.09
CDH11P55287 AC093259.1-201ENST00000509755 300 ntBASIC2□□□□□ -2.09
CDH11P55287 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2□□□□□ -2.09
CDH11P55287 RNU1-41P-201ENST00000516161 162 ntBASIC2□□□□□ -2.09
CDH11P55287 RNU1-48P-201ENST00000516400 162 ntBASIC2□□□□□ -2.09
CDH11P55287 MIR2355-201ENST00000517199 87 ntBASIC2□□□□□ -2.09
CDH11P55287 AC144568.1-201ENST00000520139 137 ntBASIC2□□□□□ -2.09
CDH11P55287 MIR1273D-201ENST00000577266 86 ntBASIC2□□□□□ -2.09
CDH11P55287 MIR5006-201ENST00000583027 110 ntBASIC2□□□□□ -2.09
CDH11P55287 AC092447.9-201ENST00000603395 144 ntBASIC2□□□□□ -2.09
CDH11P55287 AC007485.1-201ENST00000616755 206 ntBASIC2□□□□□ -2.09
CDH11P55287 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.99□□□□□ -2.09
CDH11P55287 MIR340-201ENST00000362125 95 ntBASIC1.99□□□□□ -2.09
CDH11P55287 RNU1-62P-201ENST00000362599 164 ntBASIC1.99□□□□□ -2.09
CDH11P55287 Y_RNA.148-201ENST00000363557 117 ntBASIC1.99□□□□□ -2.09
CDH11P55287 RNU6-280P-201ENST00000364145 104 ntBASIC1.99□□□□□ -2.09
CDH11P55287 SNORA51.11-201ENST00000384442 131 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AL355497.1-201ENST00000406262 551 ntBASIC1.99□□□□□ -2.09
CDH11P55287 MIR1262-201ENST00000408276 93 ntBASIC1.99□□□□□ -2.09
CDH11P55287 RNU6-1001P-201ENST00000411265 100 ntBASIC1.99□□□□□ -2.09
CDH11P55287 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH11P55287 DPH3P2-201ENST00000422618 250 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AC096644.2-201ENST00000429278 159 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AC018634.1-201ENST00000437554 401 ntBASIC1.99□□□□□ -2.09
CDH11P55287 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH11P55287 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH11P55287 PRELID3BP1-201ENST00000457142 540 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AC016925.1-201ENST00000458303 298 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AC091179.3-201ENST00000474761 144 ntBASIC1.99□□□□□ -2.09
CDH11P55287 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms