Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HMGA2P52926 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HMGA2P52926 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGA2P52926 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGA2P52926 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HMGA2P52926 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HMGA2P52926 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HMGA2P52926 RNA5SP124-201ENST00000362739 110 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 Y_RNA.243-201ENST00000364481 109 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 Y_RNA.361-201ENST00000365515 120 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 AL603914.1-201ENST00000401964 204 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 RPS26P42-201ENST00000413485 326 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 AL135786.1-201ENST00000415892 214 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 AC007919.1-201ENST00000429380 217 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HMGA2P52926 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGA2P52926 RPL21P10-201ENST00000463521 490 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 AC006445.2-201ENST00000510061 472 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 SNORA40.13-201ENST00000516379 120 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 SCARNA15.2-201ENST00000516409 127 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 Y_RNA.690-201ENST00000516603 95 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 SNORA31.16-201ENST00000516773 139 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 RN7SKP234-201ENST00000517173 224 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGA2P52926 AC015720.1-201ENST00000565251 277 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGA2P52926 AC006380.1-201ENST00000603598 186 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.86□□□□□ -1.95
HMGA2P52926 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
HMGA2P52926 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HMGA2P52926 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.86□□□□□ -1.95
HMGA2P52926 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HMGA2P52926 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGA2P52926 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HMGA2P52926 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HMGA2P52926 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGA2P52926 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HMGA2P52926 Y_RNA.341-201ENST00000365341 102 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 Y_RNA.346-201ENST00000365385 112 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 RNU6-820P-201ENST00000384273 107 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 MIR544A-201ENST00000384855 91 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 RNU6-855P-201ENST00000410395 104 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 RN7SKP61-201ENST00000410642 295 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 SNORA19.1-201ENST00000410656 129 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 RNA5SP504-201ENST00000410676 117 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGA2P52926 YPEL5P1-201ENST00000419731 367 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 AC008065.1-201ENST00000428525 348 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 AC245047.4-201ENST00000433189 144 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 KC877373.1-201ENST00000479066 408 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 RN7SL20P-201ENST00000488827 297 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 RNU6-703P-201ENST00000516946 107 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGA2P52926 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA2P52926 MIR4724-201ENST00000579485 89 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA2P52926 VN1R85P-201ENST00000601587 426 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 MIR6715B-201ENST00000637172 77 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 MIR3529-201ENST00000637713 78 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 AL035425.3-201ENST00000564206 4996 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGA2P52926 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA2P52926 AL133383.2-201ENST00000622958 2336 ntBASIC2.85□□□□□ -1.95
HMGA2P52926 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGA2P52926 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGA2P52926 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGA2P52926 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HMGA2P52926 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
HMGA2P52926 AC080128.1-201ENST00000474389 1917 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 RNU6-647P-201ENST00000364243 107 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 SNORD87-201ENST00000364849 89 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HMGA2P52926 RNU6-484P-201ENST00000384016 107 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 RNU6-629P-201ENST00000384061 103 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 RNU6-356P-201ENST00000384140 107 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 Y_RNA.456-201ENST00000384232 111 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 MIR450A2-201ENST00000385022 100 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 SNORD12C-201ENST00000386307 89 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 SNORA26.3-201ENST00000391119 136 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 MIR1255A-201ENST00000408338 113 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AC008134.1-201ENST00000420943 193 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AC012306.1-201ENST00000423267 114 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AL356867.1-201ENST00000429623 299 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGA2P52926 RPL31P41-201ENST00000477967 372 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGA2P52926 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGA2P52926 RNU6-1183P-201ENST00000517054 60 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AP004607.1-201ENST00000524456 203 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGA2P52926 AC007012.1-201ENST00000567192 175 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AC131055.1-201ENST00000584626 316 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AC136601.2-201ENST00000604356 474 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AL356157.2-201ENST00000605122 111 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.84□□□□□ -1.95
HMGA2P52926 AL035470.1-201ENST00000622571 220 ntBASIC2.84□□□□□ -1.95
HMGA2P52926 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGA2P52926 U6.99-201ENST00000637524 83 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms