Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC125232.2-201ENST00000592457 143 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.25□□□□□ -2.05
CLCNKAP51800 Y_RNA.812-201ENST00000610788 101 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 Y_RNA.784-201ENST00000613803 101 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.25□□□□□ -2.05
CLCNKAP51800 Y_RNA.787-201ENST00000616522 101 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AL132822.1-201ENST00000617063 513 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 Y_RNA.780-201ENST00000617336 101 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AC008121.3-201ENST00000618726 433 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 Y_RNA.801-201ENST00000619005 101 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.25□□□□□ -2.05
CLCNKAP51800 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.25□□□□□ -2.05
CLCNKAP51800 AC091812.1-201ENST00000432235 1948 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.24□□□□□ -2.05
CLCNKAP51800 RNA5SP361-201ENST00000362686 118 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 SNORA70B-201ENST00000384210 135 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 MIR95-201ENST00000385072 81 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 MIR628-201ENST00000385229 95 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 RNA5SP213-201ENST00000391031 106 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 AC004866.1-201ENST00000411748 78 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 EIF1P2-201ENST00000428233 350 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCNKAP51800 MTCO3P8-201ENST00000453691 755 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 AC107032.1-201ENST00000485945 480 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 AC132942.1-201ENST00000486753 483 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 SNORA25.10-201ENST00000515926 124 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 RNU1-41P-201ENST00000516161 162 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 SCARNA15.1-201ENST00000516384 125 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 RNU1-48P-201ENST00000516400 162 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 HSBP1P1-201ENST00000555205 166 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCNKAP51800 MIR4298-201ENST00000584380 73 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCNKAP51800 AL355297.2-201ENST00000604792 129 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
CLCNKAP51800 BX322639.1-202ENST00000423987 2213 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLCNKAP51800 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLCNKAP51800 RNU6-879P-201ENST00000364328 108 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 Y_RNA.645-201ENST00000391229 102 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 MRPL42P3-201ENST00000401492 326 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 AL590004.1-201ENST00000405321 300 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 RNU6-1001P-201ENST00000411265 100 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.23□□□□□ -2.05
CLCNKAP51800 AC004386.2-201ENST00000441858 148 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 AC096638.1-201ENST00000444678 216 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 TRBV12-1-201ENST00000479785 344 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 RNA5SP54-201ENST00000516951 92 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 SNORA48.11-201ENST00000517015 89 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 AL442663.2-201ENST00000554385 511 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.23□□□□□ -2.05
CLCNKAP51800 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 VN1R91P-201ENST00000594377 169 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 AC005296.1-201ENST00000616145 209 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 AC005562.2-201ENST00000618264 111 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 AC005592.1-201ENST00000566527 1640 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 MTND5P6-201ENST00000422338 1798 ntBASIC2.23□□□□□ -2.05
CLCNKAP51800 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
CLCNKAP51800 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.22□□□□□ -2.05
CLCNKAP51800 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CLCNKAP51800 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 RNU6-137P-201ENST00000363680 108 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 RN7SKP223-201ENST00000410582 62 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 RNU2-32P-201ENST00000411193 191 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.22□□□□□ -2.05
CLCNKAP51800 AC112492.4-201ENST00000456549 352 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.22□□□□□ -2.05
CLCNKAP51800 SNORA25.14-201ENST00000516481 132 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 RNU6-1198P-201ENST00000516904 67 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 RNU6-1137P-201ENST00000517073 99 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 GNAI2P1-201ENST00000541815 315 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 AC093023.1-201ENST00000547375 507 ntBASIC2.22□□□□□ -2.05
CLCNKAP51800 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLCNKAP51800 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLCNKAP51800 RNU6-450P-201ENST00000364654 107 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 RNU6-281P-201ENST00000384212 103 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 RNU6-318P-201ENST00000384283 103 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CLCNKAP51800 MIR1294-201ENST00000408503 142 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 DPH3P2-201ENST00000422618 250 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 CBX3P6-201ENST00000430257 527 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.21□□□□□ -2.06
CLCNKAP51800 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.21□□□□□ -2.06
CLCNKAP51800 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.21□□□□□ -2.06
CLCNKAP51800 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.21□□□□□ -2.06
CLCNKAP51800 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 RNU6-1098P-201ENST00000516772 96 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.21□□□□□ -2.06
CLCNKAP51800 AC018630.3-201ENST00000542637 96 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 AC026470.2-201ENST00000561492 181 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 MIR4680-201ENST00000580906 66 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 AC104695.3-201ENST00000604052 296 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.21□□□□□ -2.06
CLCNKAP51800 MIR1248-201ENST00000629190 106 ntBASIC2.21□□□□□ -2.06
CLCNKAP51800 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.21□□□□□ -2.06
CLCNKAP51800 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CLCNKAP51800 RNU6-1301P-201ENST00000362724 104 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 RNU6-727P-201ENST00000363592 107 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 RNU6-743P-201ENST00000364151 106 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms