Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC010680.1-201ENST00000590024 3590 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 RNU6-1014P-201ENST00000383940 103 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 AC007064.1-201ENST00000412238 351 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 RPS4XP11-201ENST00000446897 772 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 RNU6-948P-201ENST00000516374 107 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 RNA5SP281-201ENST00000516504 135 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 RNU6-504P-201ENST00000516568 104 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF144AP50876 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF144AP50876 MIR3138-201ENST00000585238 82 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 MIR6798-201ENST00000612887 67 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF144AP50876 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF144AP50876 UBE3AP2-201ENST00000429033 2259 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF144AP50876 AC002546.1-201ENST00000588041 2504 ntBASIC3.84□□□□□ -1.8
RNF144AP50876 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RNF144AP50876 MIR383-201ENST00000362257 73 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 Y_RNA.66-201ENST00000362862 102 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 AC097463.2-201ENST00000421074 142 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 EIF4EP4-201ENST00000424916 578 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 AP003327.1-201ENST00000529684 127 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 AC011604.1-201ENST00000545978 196 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 MIR3939-201ENST00000582614 106 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 AC013412.1-201ENST00000610687 192 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 MIR378J-201ENST00000611988 109 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 JPX_2.1-201ENST00000614161 69 ntBASIC3.83□□□□□ -1.8
RNF144AP50876 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF144AP50876 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF144AP50876 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF144AP50876 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF144AP50876 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF144AP50876 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF144AP50876 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF144AP50876 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF144AP50876 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF144AP50876 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF144AP50876 Y_RNA.49-201ENST00000362714 112 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 SNORA63.5-201ENST00000363548 123 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 SNORA1-201ENST00000384107 130 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 MIR1179-201ENST00000408703 91 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 AC008134.1-201ENST00000420943 193 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 RPL30P4-201ENST00000429309 333 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 Z98742.2-201ENST00000431564 187 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 AC006011.1-201ENST00000442758 349 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF144AP50876 HMGN2P16-201ENST00000456802 261 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 RPL39P34-201ENST00000477141 156 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 AC096725.1-201ENST00000514266 313 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 RNA5SP236-201ENST00000516169 116 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 SNORA31.9-201ENST00000516429 84 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 AC109329.2-201ENST00000519658 482 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 AL360157.1-201ENST00000565962 87 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 AC244505.7-201ENST00000599675 272 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 AL137067.1-201ENST00000615933 120 ntBASIC3.82□□□□□ -1.8
RNF144AP50876 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF144AP50876 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
RNF144AP50876 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RNF144AP50876 AL589743.1-201ENST00000551932 2712 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF144AP50876 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF144AP50876 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF144AP50876 SNORD35B-201ENST00000363660 87 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 RNU6-1240P-201ENST00000365155 104 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 RNU6-234P-201ENST00000365229 104 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 SNORA62-201ENST00000365493 153 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 SNORA37-201ENST00000384504 129 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 Y_RNA.544-201ENST00000384650 113 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 RNU6-440P-201ENST00000390882 105 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF144AP50876 RN7SL807P-201ENST00000470923 297 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 COX6CP6-201ENST00000490840 228 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 MIR2114-201ENST00000516645 80 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 RNU6-113P-201ENST00000516653 101 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF144AP50876 MIR3117-201ENST00000584034 78 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 AC107294.3-201ENST00000609211 526 ntBASIC3.81□□□□□ -1.8
RNF144AP50876 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF144AP50876 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF144AP50876 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF144AP50876 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF144AP50876 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF144AP50876 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF144AP50876 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF144AP50876 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF144AP50876 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF144AP50876 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF144AP50876 SNORD31B-201ENST00000364977 69 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 RNA5SP366-201ENST00000365454 123 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 RNU6-418P-201ENST00000384035 107 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF144AP50876 AC018634.1-201ENST00000437554 401 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 RPL23AP46-201ENST00000438548 490 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 RN7SL860P-201ENST00000473738 223 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 RPS29P21-201ENST00000496272 170 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 RN7SKP43-201ENST00000516173 320 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.8□□□□□ -1.8
RNF144AP50876 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RNF144AP50876 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms