Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SLC6A11P48066 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SLC6A11P48066 SNORA71.1-201ENST00000364523 117 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 SNORD67-201ENST00000390833 111 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 RN7SKP220-201ENST00000410611 288 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 AL365496.1-201ENST00000426885 215 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A11P48066 UBE2DNL-203ENST00000474922 222 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 RNU6-346P-201ENST00000516288 111 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 MTND5P41-201ENST00000517498 206 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A11P48066 MIR5692C2-201ENST00000577959 77 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 MIR3144-201ENST00000579460 79 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A11P48066 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
SLC6A11P48066 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A11P48066 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC6A11P48066 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A11P48066 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A11P48066 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SLC6A11P48066 AL359854.1-201ENST00000614203 1594 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 Y_RNA.435-201ENST00000384095 112 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 RNU6-763P-201ENST00000390865 106 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 MTCO2P33-201ENST00000402100 465 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 AL031003.1-201ENST00000404229 172 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.18□□□□□ -1.9
SLC6A11P48066 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A11P48066 AC097463.2-201ENST00000421074 142 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 TOMM22P2-201ENST00000430735 237 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SLC6A11P48066 RPS27P26-201ENST00000494583 239 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 MIR3186-201ENST00000577404 85 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 MIR4765-201ENST00000585007 77 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A11P48066 MIR622-201ENST00000638396 96 ntBASIC3.18□□□□□ -1.9
SLC6A11P48066 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
SLC6A11P48066 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SLC6A11P48066 SNORD115-30-201ENST00000364117 82 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 SNORA14A-201ENST00000364773 135 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 Y_RNA.398-201ENST00000383952 99 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 Y_RNA.571-201ENST00000384753 98 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 MIR1289-1-201ENST00000408836 144 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 RNU2-2P-201ENST00000410396 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 TMSB4XP3-201ENST00000445144 114 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC6A11P48066 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC6A11P48066 AC008739.2-201ENST00000597006 317 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 RPL30P11-203ENST00000598995 310 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 RNU2-4P-201ENST00000606190 192 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.15-201ENST00000611544 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.16-201ENST00000613119 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.12-201ENST00000613778 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.9-201ENST00000615427 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.11-201ENST00000616345 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.2-201ENST00000616535 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.3-201ENST00000617785 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.19-201ENST00000618602 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 RNU2-1-201ENST00000618664 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.6-201ENST00000619225 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.5-201ENST00000619465 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 U2.10-201ENST00000620268 191 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC6A11P48066 AC132825.6-201ENST00000638861 357 ntBASIC3.17□□□□□ -1.9
SLC6A11P48066 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC6A11P48066 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC6A11P48066 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC6A11P48066 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC6A11P48066 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A11P48066 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 RNU6-1305P-201ENST00000364353 104 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 RNU4-17P-201ENST00000365598 141 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 AC107083.1-201ENST00000439643 279 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A11P48066 U8.19-201ENST00000459095 133 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 Y_RNA.637-201ENST00000459424 114 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 RNU7-200P-201ENST00000516105 62 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC6A11P48066 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC6A11P48066 MIR3124-201ENST00000582636 67 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC6A11P48066 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
SLC6A11P48066 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A11P48066 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.15□□□□□ -1.9
SLC6A11P48066 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.15□□□□□ -1.9
SLC6A11P48066 Y_RNA.7-201ENST00000362352 102 ntBASIC3.15□□□□□ -1.91
SLC6A11P48066 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.91
SLC6A11P48066 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A11P48066 EIF4EP4-201ENST00000424916 578 ntBASIC3.15□□□□□ -1.91
SLC6A11P48066 AC009414.1-201ENST00000427200 443 ntBASIC3.15□□□□□ -1.91
SLC6A11P48066 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
SLC6A11P48066 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC6A11P48066 RNU5F-4P-201ENST00000516581 114 ntBASIC3.15□□□□□ -1.91
SLC6A11P48066 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.15□□□□□ -1.91
SLC6A11P48066 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A11P48066 AC103810.1-201ENST00000579873 453 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms