Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 Y_RNA.326-201ENST00000365176 113 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 Y_RNA.422-201ENST00000384054 114 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 RNU6-793P-201ENST00000384233 104 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 RNU6-308P-201ENST00000390957 107 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 MIR300-201ENST00000401138 83 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 AL357139.1-201ENST00000407792 426 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.35□□□□□ -2.03
PTPN9P43378 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.35□□□□□ -2.03
PTPN9P43378 HMGB3P3-201ENST00000510526 400 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.35□□□□□ -2.03
PTPN9P43378 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.35□□□□□ -2.03
PTPN9P43378 RNU5F-4P-201ENST00000516581 114 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 AC034114.1-201ENST00000520293 285 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 AC093023.1-201ENST00000547375 507 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 AC006600.1-201ENST00000572529 153 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 MIR5695-201ENST00000579717 85 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 MIR4435-1-201ENST00000582552 80 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 MIR5006-201ENST00000583027 110 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 SNORD58B-201ENST00000607313 66 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 AC010999.1-201ENST00000611856 324 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 AC009831.4-201ENST00000620744 325 ntBASIC2.35□□□□□ -2.03
PTPN9P43378 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
PTPN9P43378 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PTPN9P43378 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PTPN9P43378 RNU6-1301P-201ENST00000362724 104 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 Y_RNA.179-201ENST00000363844 90 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 SNORA33.2-201ENST00000365413 134 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 RNU6-1145P-201ENST00000384246 107 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 MIR524-201ENST00000385242 87 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN9P43378 AL160004.2-201ENST00000432935 350 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN9P43378 U8.22-201ENST00000459141 133 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 RNU7-169P-201ENST00000459456 61 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 RNU6-1098P-201ENST00000516772 96 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.34□□□□□ -2.03
PTPN9P43378 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 MIR5188-201ENST00000583467 113 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 SNORD11B-201ENST00000607707 90 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 MIR6840-201ENST00000611937 71 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 AC008873.1-201ENST00000625051 138 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 MIR1248-201ENST00000629190 106 ntBASIC2.34□□□□□ -2.03
PTPN9P43378 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
PTPN9P43378 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PTPN9P43378 Y_RNA.158-201ENST00000363651 101 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 SNORD31B-201ENST00000364977 69 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 MIR329-1-201ENST00000385028 80 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 MIR586-201ENST00000385035 97 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 MRPL42P3-201ENST00000401492 326 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 AL590004.1-201ENST00000405321 300 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 RNU4-53P-201ENST00000410828 140 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 AC004866.1-201ENST00000411748 78 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.33□□□□□ -2.04
PTPN9P43378 SRIP3-201ENST00000413200 219 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.33□□□□□ -2.04
PTPN9P43378 NDUFB4P10-201ENST00000452541 359 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN9P43378 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN9P43378 Y_RNA.683-201ENST00000516508 93 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 RNU6-667P-201ENST00000517186 102 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 AC022868.1-201ENST00000517767 391 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 AP003072.1-201ENST00000531740 145 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN9P43378 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN9P43378 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
PTPN9P43378 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.33□□□□□ -2.04
PTPN9P43378 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.33□□□□□ -2.04
PTPN9P43378 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
PTPN9P43378 AC005336.3-201ENST00000623833 2679 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PTPN9P43378 RNU6-318P-201ENST00000384283 103 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 RNA5SP508-201ENST00000411327 119 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 IFNA11P-201ENST00000446352 526 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 AC016925.1-201ENST00000458303 298 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 RNA5SP200-201ENST00000516360 103 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 RNU6-965P-201ENST00000516721 96 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 Y_RNA.721-201ENST00000517207 102 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 AC022616.4-201ENST00000522985 181 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 AC016925.2-201ENST00000605108 242 ntBASIC2.32□□□□□ -2.04
PTPN9P43378 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.31□□□□□ -2.04
PTPN9P43378 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 AC009487.4-201ENST00000624969 3585 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 RNY3P11-201ENST00000364153 102 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 Y_RNA.216-201ENST00000364205 93 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 RNU6-879P-201ENST00000364328 108 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 SNORA67.2-201ENST00000384300 149 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 MIR549A-201ENST00000385268 96 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 RNU6-1001P-201ENST00000411265 100 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.31□□□□□ -2.04
PTPN9P43378 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN9P43378 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN9P43378 IPO7P1-201ENST00000442031 636 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 RNU7-14P-201ENST00000459331 62 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 AC091179.3-201ENST00000474761 144 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 ATP5EP1-201ENST00000510257 156 ntBASIC2.31□□□□□ -2.04
PTPN9P43378 RPL23AP94-201ENST00000512518 302 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms