Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SNORD114-7-201ENST00000362520 77 ntBASIC3.21□□□□□ -1.9
GDNFP39905 RNU6-1080P-201ENST00000383982 107 ntBASIC3.21□□□□□ -1.9
GDNFP39905 RNU6-1323P-201ENST00000384025 107 ntBASIC3.21□□□□□ -1.9
GDNFP39905 AP000567.1-201ENST00000406413 156 ntBASIC3.21□□□□□ -1.9
GDNFP39905 YME1L1P1-201ENST00000429435 297 ntBASIC3.21□□□□□ -1.9
GDNFP39905 NDUFB1P1-201ENST00000435191 180 ntBASIC3.21□□□□□ -1.9
GDNFP39905 SNORA71B-202ENST00000439232 272 ntBASIC3.21□□□□□ -1.9
GDNFP39905 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.21□□□□□ -1.9
GDNFP39905 RNU6-437P-201ENST00000459408 95 ntBASIC3.21□□□□□ -1.9
GDNFP39905 RNU6-1098P-201ENST00000516772 96 ntBASIC3.21□□□□□ -1.9
GDNFP39905 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.21□□□□□ -1.9
GDNFP39905 AL670379.3-201ENST00000605040 251 ntBASIC3.21□□□□□ -1.9
GDNFP39905 RNU1-30P-201ENST00000606575 163 ntBASIC3.21□□□□□ -1.9
GDNFP39905 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GDNFP39905 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.21□□□□□ -1.9
GDNFP39905 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
GDNFP39905 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.2□□□□□ -1.9
GDNFP39905 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GDNFP39905 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.2□□□□□ -1.9
GDNFP39905 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
GDNFP39905 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.2□□□□□ -1.9
GDNFP39905 AL356292.1-201ENST00000283110 373 ntBASIC3.2□□□□□ -1.9
GDNFP39905 RNU6-978P-201ENST00000364371 103 ntBASIC3.2□□□□□ -1.9
GDNFP39905 RNU4-41P-201ENST00000364426 143 ntBASIC3.2□□□□□ -1.9
GDNFP39905 SNORD14D-201ENST00000384390 87 ntBASIC3.2□□□□□ -1.9
GDNFP39905 SNORD116-21-201ENST00000384507 92 ntBASIC3.2□□□□□ -1.9
GDNFP39905 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
GDNFP39905 RN7SKP101-201ENST00000411376 320 ntBASIC3.2□□□□□ -1.9
GDNFP39905 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.2□□□□□ -1.9
GDNFP39905 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.2□□□□□ -1.9
GDNFP39905 AC010099.1-201ENST00000455434 375 ntBASIC3.2□□□□□ -1.9
GDNFP39905 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
GDNFP39905 RPL30P14-201ENST00000482744 348 ntBASIC3.2□□□□□ -1.9
GDNFP39905 AC110768.1-201ENST00000509222 400 ntBASIC3.2□□□□□ -1.9
GDNFP39905 RNU1-61P-201ENST00000516107 151 ntBASIC3.2□□□□□ -1.9
GDNFP39905 RN7SKP21-201ENST00000516503 220 ntBASIC3.2□□□□□ -1.9
GDNFP39905 AC027419.1-201ENST00000522976 328 ntBASIC3.2□□□□□ -1.9
GDNFP39905 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.2□□□□□ -1.9
GDNFP39905 RPL30P11-203ENST00000598995 310 ntBASIC3.2□□□□□ -1.9
GDNFP39905 AL049861.1-201ENST00000603130 150 ntBASIC3.2□□□□□ -1.9
GDNFP39905 AC005972.2-201ENST00000604690 348 ntBASIC3.2□□□□□ -1.9
GDNFP39905 AC068724.3-201ENST00000625906 87 ntBASIC3.2□□□□□ -1.9
GDNFP39905 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.2□□□□□ -1.9
GDNFP39905 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GDNFP39905 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GDNFP39905 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
GDNFP39905 Y_RNA.35-201ENST00000362601 101 ntBASIC3.19□□□□□ -1.9
GDNFP39905 SNORA27.1-201ENST00000362604 124 ntBASIC3.19□□□□□ -1.9
GDNFP39905 Y_RNA.120-201ENST00000363304 110 ntBASIC3.19□□□□□ -1.9
GDNFP39905 RNU6-484P-201ENST00000384016 107 ntBASIC3.19□□□□□ -1.9
GDNFP39905 Y_RNA.432-201ENST00000384087 111 ntBASIC3.19□□□□□ -1.9
GDNFP39905 MIR548A3-201ENST00000385297 97 ntBASIC3.19□□□□□ -1.9
GDNFP39905 RNA5SP496-201ENST00000391240 109 ntBASIC3.19□□□□□ -1.9
GDNFP39905 AL135786.1-201ENST00000415892 214 ntBASIC3.19□□□□□ -1.9
GDNFP39905 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.19□□□□□ -1.9
GDNFP39905 HMGN2P16-201ENST00000456802 261 ntBASIC3.19□□□□□ -1.9
GDNFP39905 U3.44-201ENST00000458938 192 ntBASIC3.19□□□□□ -1.9
GDNFP39905 AC090515.1-201ENST00000465295 476 ntBASIC3.19□□□□□ -1.9
GDNFP39905 RNU5F-4P-201ENST00000516581 114 ntBASIC3.19□□□□□ -1.9
GDNFP39905 RNU6-63P-201ENST00000516690 95 ntBASIC3.19□□□□□ -1.9
GDNFP39905 AP000867.2-201ENST00000532468 320 ntBASIC3.19□□□□□ -1.9
GDNFP39905 AL020997.2-201ENST00000602607 184 ntBASIC3.19□□□□□ -1.9
GDNFP39905 AL138880.2-201ENST00000616214 239 ntBASIC3.19□□□□□ -1.9
GDNFP39905 MIR6875-201ENST00000617506 72 ntBASIC3.19□□□□□ -1.9
GDNFP39905 MIR6076-201ENST00000617521 113 ntBASIC3.19□□□□□ -1.9
GDNFP39905 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.19□□□□□ -1.9
GDNFP39905 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
GDNFP39905 AC000403.1-201ENST00000613696 3585 ntBASIC3.19□□□□□ -1.9
GDNFP39905 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.18□□□□□ -1.9
GDNFP39905 AL021368.2-201ENST00000606125 5352 ntBASIC3.18□□□□□ -1.9
GDNFP39905 AC008555.8-201ENST00000623602 2168 ntBASIC3.18□□□□□ -1.9
GDNFP39905 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GDNFP39905 MFSD8-236ENST00000641509 4050 ntBASIC3.18□□□□□ -1.9
GDNFP39905 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
GDNFP39905 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.18□□□□□ -1.9
GDNFP39905 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
GDNFP39905 RNU6-1164P-201ENST00000364428 107 ntBASIC3.18□□□□□ -1.9
GDNFP39905 RNU6-198P-201ENST00000384258 104 ntBASIC3.18□□□□□ -1.9
GDNFP39905 MIR591-201ENST00000385290 95 ntBASIC3.18□□□□□ -1.9
GDNFP39905 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.18□□□□□ -1.9
GDNFP39905 RNU7-57P-201ENST00000459540 60 ntBASIC3.18□□□□□ -1.9
GDNFP39905 RPS26P55-201ENST00000471178 356 ntBASIC3.18□□□□□ -1.9
GDNFP39905 RNU7-116P-201ENST00000516940 62 ntBASIC3.18□□□□□ -1.9
GDNFP39905 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.18□□□□□ -1.9
GDNFP39905 NDUFA5P6-201ENST00000542110 379 ntBASIC3.18□□□□□ -1.9
GDNFP39905 MIR3160-1-201ENST00000577972 85 ntBASIC3.18□□□□□ -1.9
GDNFP39905 AL606490.9-201ENST00000603331 271 ntBASIC3.18□□□□□ -1.9
GDNFP39905 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.18□□□□□ -1.9
GDNFP39905 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.18□□□□□ -1.9
GDNFP39905 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
GDNFP39905 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GDNFP39905 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GDNFP39905 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.18□□□□□ -1.9
GDNFP39905 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.18□□□□□ -1.9
GDNFP39905 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
GDNFP39905 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GDNFP39905 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
GDNFP39905 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
GDNFP39905 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GDNFP39905 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms