Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
CD40P25942 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.85□□□□□ -1.95
CD40P25942 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CD40P25942 UBE2WP1-201ENST00000362030 340 ntBASIC2.84□□□□□ -1.95
CD40P25942 RNU6-1180P-201ENST00000364935 107 ntBASIC2.84□□□□□ -1.95
CD40P25942 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CD40P25942 RNU6-1289P-201ENST00000384431 106 ntBASIC2.84□□□□□ -1.95
CD40P25942 MT-TR-201ENST00000387439 65 ntBASIC2.84□□□□□ -1.95
CD40P25942 Y_RNA.590-201ENST00000410140 107 ntBASIC2.84□□□□□ -1.95
CD40P25942 RNU2-48P-201ENST00000410694 191 ntBASIC2.84□□□□□ -1.95
CD40P25942 RNU4-47P-201ENST00000410876 114 ntBASIC2.84□□□□□ -1.95
CD40P25942 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.84□□□□□ -1.95
CD40P25942 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
CD40P25942 Z98949.2-201ENST00000440996 144 ntBASIC2.84□□□□□ -1.95
CD40P25942 UBBP3-201ENST00000445497 241 ntBASIC2.84□□□□□ -1.95
CD40P25942 RPS4XP2-201ENST00000458402 793 ntBASIC2.84□□□□□ -1.95
CD40P25942 CENPBD1P1-201ENST00000464061 469 ntBASIC2.84□□□□□ -1.95
CD40P25942 RN7SL504P-201ENST00000494496 287 ntBASIC2.84□□□□□ -1.95
CD40P25942 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.84□□□□□ -1.95
CD40P25942 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.84□□□□□ -1.95
CD40P25942 RNU6-138P-201ENST00000515952 107 ntBASIC2.84□□□□□ -1.95
CD40P25942 RNU6-1231P-201ENST00000517185 103 ntBASIC2.84□□□□□ -1.95
CD40P25942 RNU6-667P-201ENST00000517186 102 ntBASIC2.84□□□□□ -1.95
CD40P25942 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
CD40P25942 AC130289.1-201ENST00000577321 73 ntBASIC2.84□□□□□ -1.95
CD40P25942 AC013412.1-201ENST00000610687 192 ntBASIC2.84□□□□□ -1.95
CD40P25942 uc_338.1-201ENST00000612113 180 ntBASIC2.84□□□□□ -1.95
CD40P25942 MIR8057-201ENST00000620957 69 ntBASIC2.84□□□□□ -1.95
CD40P25942 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.84□□□□□ -1.96
CD40P25942 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.83□□□□□ -1.96
CD40P25942 RNY1-201ENST00000364228 113 ntBASIC2.83□□□□□ -1.96
CD40P25942 RNU6-200P-201ENST00000364743 107 ntBASIC2.83□□□□□ -1.96
CD40P25942 RNU2-61P-201ENST00000411069 191 ntBASIC2.83□□□□□ -1.96
CD40P25942 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.83□□□□□ -1.96
CD40P25942 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.83□□□□□ -1.96
CD40P25942 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.83□□□□□ -1.96
CD40P25942 AL137159.1-201ENST00000452808 512 ntBASIC2.83□□□□□ -1.96
CD40P25942 AC018868.1-201ENST00000491307 315 ntBASIC2.83□□□□□ -1.96
CD40P25942 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.83□□□□□ -1.96
CD40P25942 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CD40P25942 RNU6-948P-201ENST00000516374 107 ntBASIC2.83□□□□□ -1.96
CD40P25942 Y_RNA.679-201ENST00000516416 91 ntBASIC2.83□□□□□ -1.96
CD40P25942 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
CD40P25942 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.83□□□□□ -1.96
CD40P25942 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.83□□□□□ -1.96
CD40P25942 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
CD40P25942 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.83□□□□□ -1.96
CD40P25942 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CD40P25942 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.82□□□□□ -1.96
CD40P25942 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CD40P25942 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.82□□□□□ -1.96
CD40P25942 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CD40P25942 RNU1-70P-201ENST00000362618 164 ntBASIC2.82□□□□□ -1.96
CD40P25942 Y_RNA.122-201ENST00000363331 96 ntBASIC2.82□□□□□ -1.96
CD40P25942 RNU6-525P-201ENST00000363685 104 ntBASIC2.82□□□□□ -1.96
CD40P25942 MIR592-201ENST00000384959 97 ntBASIC2.82□□□□□ -1.96
CD40P25942 RNU6-1248P-201ENST00000391096 64 ntBASIC2.82□□□□□ -1.96
CD40P25942 RN7SKP58-201ENST00000411010 305 ntBASIC2.82□□□□□ -1.96
CD40P25942 AC024067.1-201ENST00000426199 223 ntBASIC2.82□□□□□ -1.96
CD40P25942 AC104389.3-201ENST00000445629 235 ntBASIC2.82□□□□□ -1.96
CD40P25942 RNU6-221P-201ENST00000459541 99 ntBASIC2.82□□□□□ -1.96
CD40P25942 AC109925.1-201ENST00000478069 331 ntBASIC2.82□□□□□ -1.96
CD40P25942 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.82□□□□□ -1.96
CD40P25942 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.82□□□□□ -1.96
CD40P25942 AC005828.6-201ENST00000606610 232 ntBASIC2.82□□□□□ -1.96
CD40P25942 AC004832.5-201ENST00000608677 401 ntBASIC2.82□□□□□ -1.96
CD40P25942 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.82□□□□□ -1.96
CD40P25942 RMST_8.1-201ENST00000610287 165 ntBASIC2.82□□□□□ -1.96
CD40P25942 AL442067.1-201ENST00000613261 223 ntBASIC2.82□□□□□ -1.96
CD40P25942 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD40P25942 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD40P25942 RNU6-1235P-201ENST00000384559 107 ntBASIC2.81□□□□□ -1.96
CD40P25942 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.81□□□□□ -1.96
CD40P25942 MIR1298-201ENST00000408783 112 ntBASIC2.81□□□□□ -1.96
CD40P25942 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.81□□□□□ -1.96
CD40P25942 MTND5P15-201ENST00000434246 349 ntBASIC2.81□□□□□ -1.96
CD40P25942 AC115115.1-201ENST00000449927 248 ntBASIC2.81□□□□□ -1.96
CD40P25942 RNU6-498P-201ENST00000459468 107 ntBASIC2.81□□□□□ -1.96
CD40P25942 AC010531.2-201ENST00000465012 153 ntBASIC2.81□□□□□ -1.96
CD40P25942 AC093259.1-201ENST00000509755 300 ntBASIC2.81□□□□□ -1.96
CD40P25942 SNORD116-28-201ENST00000516123 91 ntBASIC2.81□□□□□ -1.96
CD40P25942 RN7SKP282-201ENST00000516824 299 ntBASIC2.81□□□□□ -1.96
CD40P25942 RNU6-56P-201ENST00000516986 93 ntBASIC2.81□□□□□ -1.96
CD40P25942 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.81□□□□□ -1.96
CD40P25942 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD40P25942 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD40P25942 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CD40P25942 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CD40P25942 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CD40P25942 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.8□□□□□ -1.96
CD40P25942 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CD40P25942 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
CD40P25942 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.8□□□□□ -1.96
CD40P25942 RNA5SP374-201ENST00000362939 125 ntBASIC2.8□□□□□ -1.96
CD40P25942 Y_RNA.200-201ENST00000364018 102 ntBASIC2.8□□□□□ -1.96
CD40P25942 Y_RNA.217-201ENST00000364214 105 ntBASIC2.8□□□□□ -1.96
CD40P25942 Y_RNA.274-201ENST00000364714 101 ntBASIC2.8□□□□□ -1.96
CD40P25942 SNORA25B-201ENST00000365507 128 ntBASIC2.8□□□□□ -1.96
CD40P25942 AL139156.1-201ENST00000412785 841 ntBASIC2.8□□□□□ -1.96
CD40P25942 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms