Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DOBP13765 RNU6-1309P-201ENST00000363305 108 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 Y_RNA.133-201ENST00000363428 110 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 Y_RNA.210-201ENST00000364161 110 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 RNU6-1180P-201ENST00000364935 107 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 RNU6-611P-201ENST00000384276 104 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 AL139095.1-201ENST00000404326 391 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 RNA5SP181-201ENST00000410246 98 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DOBP13765 AC010095.1-201ENST00000443543 144 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 IFNA11P-201ENST00000446352 526 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 RPS23P5-201ENST00000495419 428 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DOBP13765 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DOBP13765 AC074133.1-201ENST00000515696 183 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 MIR4659A-201ENST00000580269 81 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 RAC1P9-201ENST00000604990 392 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 SNORD11B-201ENST00000607707 90 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 AC240442.1-201ENST00000616055 283 ntBASIC2.14□□□□□ -2.07
HLA-DOBP13765 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
HLA-DOBP13765 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DOBP13765 AL136360.1-201ENST00000503377 1900 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HLA-DOBP13765 RNU6-234P-201ENST00000365229 104 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DOBP13765 RNU6-546P-201ENST00000383991 107 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 Y_RNA.439-201ENST00000384119 94 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 AC004866.1-201ENST00000411748 78 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DOBP13765 PCNPP5-201ENST00000452246 481 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 MTATP8P1-201ENST00000467115 207 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 SNORA40.9-201ENST00000515895 93 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 RNU5F-4P-201ENST00000516581 114 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 SNORA40.15-201ENST00000516884 107 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 RN7SKP40-201ENST00000517211 242 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 AC022616.8-201ENST00000533569 253 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 MZT1P2-201ENST00000604387 248 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DOBP13765 AC067747.1-201ENST00000608026 250 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DOBP13765 AC010297.1-201ENST00000623948 149 ntBASIC2.13□□□□□ -2.07
HLA-DOBP13765 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DOBP13765 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DOBP13765 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 Y_RNA.149-201ENST00000363558 117 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 Y_RNA.176-201ENST00000363815 109 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 Y_RNA.183-201ENST00000363882 113 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 MIR561-201ENST00000385216 97 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 RNU6-1109P-201ENST00000391187 107 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DOBP13765 RNU2-32P-201ENST00000411193 191 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 UQCRBP2-201ENST00000447827 297 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 MTCO2P24-201ENST00000515611 426 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 RNU6-1143P-201ENST00000516125 104 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 RNU6-635P-201ENST00000516651 102 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 RNU6-1098P-201ENST00000516772 96 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 RNU6-897P-201ENST00000517135 105 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC109329.2-201ENST00000519658 482 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC021269.2-201ENST00000532318 330 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC008269.2-201ENST00000561915 1105 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC233702.2-202ENST00000562547 291 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 MIR3162-201ENST00000581818 82 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC006023.1-201ENST00000603944 259 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC103810.6-201ENST00000606708 136 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 MIR1291-201ENST00000627649 87 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 AC068205.3-201ENST00000636385 468 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 ZNF271P-202ENST00000465539 1970 ntBASIC2.12□□□□□ -2.07
HLA-DOBP13765 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DOBP13765 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DOBP13765 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 RNU1-23P-201ENST00000363361 144 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 RNA5SP125-201ENST00000364843 120 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 RNU6-926P-201ENST00000384075 107 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 Y_RNA.510-201ENST00000384511 114 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 RPL21P1-201ENST00000399532 476 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 AL033519.2-201ENST00000403958 392 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 RNU2-25P-201ENST00000411041 191 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 RNU6-130P-201ENST00000411112 103 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 MTCYBP9-201ENST00000431021 303 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 RPL26P26-201ENST00000480251 434 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 RNU6-397P-201ENST00000516226 104 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 AC023824.2-201ENST00000566185 400 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms