Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 RNU1-117P-201ENST00000517041 158 ntBASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 MIR3169-201ENST00000578032 83 ntBASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 MIR548S-201ENST00000581352 82 ntBASIC1.92□□□□□ -2.1
RAB40ALP0C0E4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 ZNF72P-201ENST00000425869 1908 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC009487.4-201ENST00000624969 3585 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 MIR340-201ENST00000362125 95 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 RNU6-280P-201ENST00000364145 104 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 U3.40-201ENST00000408706 208 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 MTND3P23-201ENST00000431980 347 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC007677.1-201ENST00000445757 515 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 RNA5SP233-201ENST00000459153 113 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC114982.1-201ENST00000469402 321 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AP000870.1-201ENST00000472927 406 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 SCARNA16.2-201ENST00000516520 172 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 RNU6-344P-201ENST00000516635 111 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 RNU6-1213P-201ENST00000517075 94 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 UBL5P4-201ENST00000562584 236 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AP001094.1-201ENST00000579805 193 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC113139.1-201ENST00000605049 239 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 SNORD11B-201ENST00000607707 90 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AL162373.1-201ENST00000620433 407 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC098657.3-201ENST00000620434 263 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 AC008555.8-201ENST00000623602 2168 ntBASIC1.91□□□□□ -2.1
RAB40ALP0C0E4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 RNU6-418P-201ENST00000384035 107 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 RNU6-159P-201ENST00000391080 106 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 MTCYBP10-201ENST00000424905 650 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 MTCO1P44-201ENST00000441935 243 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 AL357134.1-201ENST00000445848 426 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 AC074290.1-201ENST00000448883 135 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 AL021397.1-201ENST00000451806 248 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 HMGN2P9-201ENST00000476875 229 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 RNU6-559P-201ENST00000516151 98 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 RNU6-548P-201ENST00000517083 115 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 MIR5701-3-201ENST00000578890 82 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 MIR5002-201ENST00000584713 97 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 MIR5701-1-201ENST00000585138 82 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 AC083806.3-201ENST00000614016 455 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 MIR5701-2-201ENST00000615634 82 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 U1.36-201ENST00000620684 176 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
RAB40ALP0C0E4 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 Y_RNA.474-201ENST00000384341 102 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 MIR586-201ENST00000385035 97 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 RNA5SP501-201ENST00000410990 112 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 AL158823.1-201ENST00000418441 478 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 USP9YP16-201ENST00000430287 407 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 USP9YP23-201ENST00000455085 407 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 AC091951.2-201ENST00000500762 203 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 SUMO2P18-201ENST00000518873 252 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 MIR5695-201ENST00000579717 85 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 MIR5690-201ENST00000583739 73 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 AC092794.2-201ENST00000620933 563 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 AL078596.1-201ENST00000624856 447 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 AL159152.1-201ENST00000635019 2587 ntBASIC1.89□□□□□ -2.11
RAB40ALP0C0E4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 RNU6-222P-201ENST00000362438 107 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 Y_RNA.106-201ENST00000363189 100 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 RNU6-1188P-201ENST00000363795 107 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 RNU6-975P-201ENST00000384296 105 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 MIR190B-201ENST00000401119 79 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 AL033519.2-201ENST00000403958 392 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 RNU6-1304P-201ENST00000411374 106 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 AL139156.1-201ENST00000412785 841 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 RPL23AP7-203ENST00000449021 469 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 RPL23AP3-201ENST00000453844 468 ntBASIC1.88□□□□□ -2.11
RAB40ALP0C0E4 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms