Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.29□□□□□ -1.88
APPP05067 EIF4A1P12-201ENST00000551910 141 ntBASIC3.29□□□□□ -1.88
APPP05067 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.29□□□□□ -1.88
APPP05067 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
APPP05067 AC080128.1-201ENST00000474389 1917 ntBASIC3.29□□□□□ -1.88
APPP05067 MTND5P6-201ENST00000422338 1798 ntBASIC3.28□□□□□ -1.88
APPP05067 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.28□□□□□ -1.88
APPP05067 MIR26A1-201ENST00000362205 77 ntBASIC3.28□□□□□ -1.88
APPP05067 U3.9-201ENST00000363823 204 ntBASIC3.28□□□□□ -1.88
APPP05067 Y_RNA.179-201ENST00000363844 90 ntBASIC3.28□□□□□ -1.88
APPP05067 RNU6-1318P-201ENST00000365389 103 ntBASIC3.28□□□□□ -1.88
APPP05067 RNU6-1083P-201ENST00000384022 107 ntBASIC3.28□□□□□ -1.88
APPP05067 MIR627-201ENST00000384979 97 ntBASIC3.28□□□□□ -1.88
APPP05067 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APPP05067 MRPL35P1-201ENST00000404272 572 ntBASIC3.28□□□□□ -1.88
APPP05067 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
APPP05067 RNU6-496P-201ENST00000516145 99 ntBASIC3.28□□□□□ -1.88
APPP05067 RNA5SP54-201ENST00000516951 92 ntBASIC3.28□□□□□ -1.88
APPP05067 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.28□□□□□ -1.88
APPP05067 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.28□□□□□ -1.88
APPP05067 SDR42E1P4-201ENST00000620894 481 ntBASIC3.28□□□□□ -1.88
APPP05067 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.28□□□□□ -1.88
APPP05067 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APPP05067 RNU1-138P-201ENST00000384093 164 ntBASIC3.27□□□□□ -1.89
APPP05067 AL512633.1-201ENST00000399931 655 ntBASIC3.27□□□□□ -1.89
APPP05067 SNORD88.1-201ENST00000408684 91 ntBASIC3.27□□□□□ -1.89
APPP05067 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.27□□□□□ -1.89
APPP05067 IFNA11P-201ENST00000446352 526 ntBASIC3.27□□□□□ -1.89
APPP05067 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.27□□□□□ -1.89
APPP05067 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.27□□□□□ -1.89
APPP05067 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.27□□□□□ -1.89
APPP05067 Y_RNA.683-201ENST00000516508 93 ntBASIC3.27□□□□□ -1.89
APPP05067 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.27□□□□□ -1.89
APPP05067 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.27□□□□□ -1.89
APPP05067 MIR5006-201ENST00000583027 110 ntBASIC3.27□□□□□ -1.89
APPP05067 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APPP05067 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
APPP05067 Y_RNA.101-201ENST00000363154 102 ntBASIC3.26□□□□□ -1.89
APPP05067 RNU6-137P-201ENST00000363680 108 ntBASIC3.26□□□□□ -1.89
APPP05067 RNU6-793P-201ENST00000384233 104 ntBASIC3.26□□□□□ -1.89
APPP05067 Y_RNA.556-201ENST00000384677 113 ntBASIC3.26□□□□□ -1.89
APPP05067 SUMO1P4-201ENST00000429430 302 ntBASIC3.26□□□□□ -1.89
APPP05067 UQCRBP2-201ENST00000447827 297 ntBASIC3.26□□□□□ -1.89
APPP05067 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.26□□□□□ -1.89
APPP05067 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.26□□□□□ -1.89
APPP05067 RNA5SP356-201ENST00000515972 94 ntBASIC3.26□□□□□ -1.89
APPP05067 RNU2-44P-201ENST00000516795 194 ntBASIC3.26□□□□□ -1.89
APPP05067 SCARNA11.3-201ENST00000517276 130 ntBASIC3.26□□□□□ -1.89
APPP05067 AC004486.1-201ENST00000546846 233 ntBASIC3.26□□□□□ -1.89
APPP05067 AC018448.1-201ENST00000552843 316 ntBASIC3.26□□□□□ -1.89
APPP05067 AL049779.4-201ENST00000604500 156 ntBASIC3.26□□□□□ -1.89
APPP05067 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.26□□□□□ -1.89
APPP05067 AC005562.2-201ENST00000618264 111 ntBASIC3.26□□□□□ -1.89
APPP05067 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.26□□□□□ -1.89
APPP05067 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.25□□□□□ -1.89
APPP05067 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
APPP05067 RNU6-280P-201ENST00000364145 104 ntBASIC3.25□□□□□ -1.89
APPP05067 SNORD32B-201ENST00000364460 84 ntBASIC3.25□□□□□ -1.89
APPP05067 RNU6-907P-201ENST00000390924 102 ntBASIC3.25□□□□□ -1.89
APPP05067 Y_RNA.595-201ENST00000410403 105 ntBASIC3.25□□□□□ -1.89
APPP05067 RNU2-52P-201ENST00000410680 190 ntBASIC3.25□□□□□ -1.89
APPP05067 RNA5SP21-201ENST00000410917 96 ntBASIC3.25□□□□□ -1.89
APPP05067 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.25□□□□□ -1.89
APPP05067 MTND4LP30-201ENST00000454092 297 ntBASIC3.25□□□□□ -1.89
APPP05067 SNORD109B-201ENST00000458961 67 ntBASIC3.25□□□□□ -1.89
APPP05067 SNORD109A-201ENST00000459128 67 ntBASIC3.25□□□□□ -1.89
APPP05067 HMGB3P17-201ENST00000504195 649 ntBASIC3.25□□□□□ -1.89
APPP05067 RNA5SP112-201ENST00000515937 99 ntBASIC3.25□□□□□ -1.89
APPP05067 RNU6-1338P-201ENST00000516328 91 ntBASIC3.25□□□□□ -1.89
APPP05067 SNORA9.3-201ENST00000516383 129 ntBASIC3.25□□□□□ -1.89
APPP05067 RNU6-965P-201ENST00000516721 96 ntBASIC3.25□□□□□ -1.89
APPP05067 RNU6-1198P-201ENST00000516904 67 ntBASIC3.25□□□□□ -1.89
APPP05067 MIR4319-201ENST00000577285 85 ntBASIC3.25□□□□□ -1.89
APPP05067 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.25□□□□□ -1.89
APPP05067 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.25□□□□□ -1.89
APPP05067 MIR3605-201ENST00000583214 100 ntBASIC3.25□□□□□ -1.89
APPP05067 MIR4298-201ENST00000584380 73 ntBASIC3.25□□□□□ -1.89
APPP05067 AC005357.1-201ENST00000588399 301 ntBASIC3.25□□□□□ -1.89
APPP05067 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.25□□□□□ -1.89
APPP05067 SNORA68.1-201ENST00000364537 132 ntBASIC3.24□□□□□ -1.89
APPP05067 RNU6-1175P-201ENST00000365200 107 ntBASIC3.24□□□□□ -1.89
APPP05067 Y_RNA.350-201ENST00000365409 98 ntBASIC3.24□□□□□ -1.89
APPP05067 Y_RNA.581-201ENST00000391017 97 ntBASIC3.24□□□□□ -1.89
APPP05067 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.24□□□□□ -1.89
APPP05067 RAB28P5-201ENST00000427490 651 ntBASIC3.24□□□□□ -1.89
APPP05067 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.24□□□□□ -1.89
APPP05067 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.24□□□□□ -1.89
APPP05067 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.24□□□□□ -1.89
APPP05067 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.24□□□□□ -1.89
APPP05067 RNU6-625P-201ENST00000459412 107 ntBASIC3.24□□□□□ -1.89
APPP05067 RNU6-1098P-201ENST00000516772 96 ntBASIC3.24□□□□□ -1.89
APPP05067 RNU7-110P-201ENST00000516891 62 ntBASIC3.24□□□□□ -1.89
APPP05067 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.24□□□□□ -1.89
APPP05067 MIR4423-201ENST00000580922 80 ntBASIC3.24□□□□□ -1.89
APPP05067 AC090616.3-201ENST00000582184 217 ntBASIC3.24□□□□□ -1.89
APPP05067 AL670379.2-201ENST00000604983 252 ntBASIC3.24□□□□□ -1.89
APPP05067 AC091932.3-201ENST00000624223 323 ntBASIC3.24□□□□□ -1.89
APPP05067 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
APPP05067 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.23□□□□□ -1.89
APPP05067 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms