Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC107308.1-201ENST00000615897 301 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC009509.4-201ENST00000619202 509 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC138649.3-201ENST00000622154 254 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AL450472.1-202ENST00000637286 180 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.28□□□□□ -2.37
COL1A1P02452 RNA5SP109-201ENST00000391010 116 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AC016717.1-201ENST00000448918 286 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
COL1A1P02452 AC010486.2-201ENST00000505572 483 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.28□□□□□ -2.37
COL1A1P02452 IGLVI-20-201ENST00000519296 130 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AL391840.1-201ENST00000571144 367 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AC005771.1-201ENST00000585581 349 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AL162424.1-201ENST00000602325 221 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AC064872.1-201ENST00000604823 1072 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AL353765.1-201ENST00000605514 183 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AC027807.2-201ENST00000616099 408 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 AC011155.2-201ENST00000623202 216 ntBASIC0.28□□□□□ -2.37
COL1A1P02452 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.27□□□□□ -2.37
COL1A1P02452 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
COL1A1P02452 RNU6-660P-201ENST00000364566 109 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 SNORA20.2-201ENST00000383922 131 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 RNU6-83P-201ENST00000384568 112 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 RNU6-440P-201ENST00000390882 105 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AF228730.1-201ENST00000397972 663 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.27□□□□□ -2.37
COL1A1P02452 CDK8P2-201ENST00000415020 547 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 HSFY7P-201ENST00000432672 318 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 FABP5P4-201ENST00000437203 171 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 HSFY8P-201ENST00000437934 318 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.27□□□□□ -2.37
COL1A1P02452 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.27□□□□□ -2.37
COL1A1P02452 AC074290.1-201ENST00000448883 135 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.27□□□□□ -2.37
COL1A1P02452 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.27□□□□□ -2.37
COL1A1P02452 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.27□□□□□ -2.37
COL1A1P02452 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.27□□□□□ -2.37
COL1A1P02452 AC022878.1-201ENST00000530684 149 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.27□□□□□ -2.37
COL1A1P02452 AC103996.1-201ENST00000555468 102 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.27□□□□□ -2.37
COL1A1P02452 MIR5006-201ENST00000583027 110 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 MIR4493-201ENST00000584016 73 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AP001836.1-201ENST00000604675 523 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 MTRNR2L2-201ENST00000604882 87 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AC104458.1-201ENST00000608243 463 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 TCL6_2.1-201ENST00000615162 119 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.27□□□□□ -2.37
COL1A1P02452 MIR8054-201ENST00000620877 86 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AL049777.1-201ENST00000622740 518 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 AC106754.2-201ENST00000623006 233 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 SNORD3E-202ENST00000627253 216 ntBASIC0.27□□□□□ -2.37
COL1A1P02452 RNU6-501P-201ENST00000364072 100 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 Y_RNA.287-201ENST00000364853 94 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 RNU6-169P-201ENST00000365336 107 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 Y_RNA.363-201ENST00000365529 113 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 RNU6-434P-201ENST00000384376 107 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 RNU6-393P-201ENST00000384475 107 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 MIR653-201ENST00000385279 96 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 HMGN2P34-201ENST00000437647 269 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 AL512286.1-201ENST00000439244 400 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 RPL39P39-201ENST00000455840 151 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 RNU7-90P-201ENST00000459216 62 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 SRRM1P2-201ENST00000464531 1192 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 AC098869.1-201ENST00000481627 292 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 RPS26P48-201ENST00000491713 339 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 CYCTP-201ENST00000504253 315 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 AC113410.1-201ENST00000505029 247 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.26□□□□□ -2.37
COL1A1P02452 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.26□□□□□ -2.37
COL1A1P02452 RNU6-922P-201ENST00000516753 99 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 AC022616.3-201ENST00000523940 148 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 AL121992.2-201ENST00000606262 256 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 AL157392.4-201ENST00000609756 345 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 AL133173.2-201ENST00000614270 90 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 AC104010.1-201ENST00000616889 150 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 uc_338.11-201ENST00000619132 160 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.26□□□□□ -2.37
COL1A1P02452 CASC19-280ENST00000642102 1351 ntBASIC0.26□□□□□ -2.37
COL1A1P02452 SNORD18A-201ENST00000363753 72 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 Y_RNA.185-201ENST00000363894 100 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNU4-76P-201ENST00000364509 141 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNU6-715P-201ENST00000365204 103 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNU6-827P-201ENST00000365553 106 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNU6-969P-201ENST00000383900 105 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNU6-1106P-201ENST00000390845 107 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNU6-550P-201ENST00000391057 101 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AL034345.1-201ENST00000407768 123 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.25□□□□□ -2.37
COL1A1P02452 MTCO2P23-201ENST00000425216 680 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AL606662.1-201ENST00000445763 553 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 NFU1P2-201ENST00000448700 469 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AL031274.1-201ENST00000450334 232 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AC067940.1-201ENST00000458411 300 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNU7-57P-201ENST00000459540 60 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 Y_RNA.672-201ENST00000516289 104 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 SNORA31.10-201ENST00000516482 106 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.25□□□□□ -2.37
COL1A1P02452 MIR5695-201ENST00000579717 85 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms