Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 MIR4667-201ENST00000578933 66 ntBASIC0.2□□□□□ -2.38
PCF11O94913 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.2□□□□□ -2.38
PCF11O94913 AL136317.1-201ENST00000612653 226 ntBASIC0.2□□□□□ -2.38
PCF11O94913 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.2□□□□□ -2.38
PCF11O94913 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.2□□□□□ -2.38
PCF11O94913 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.2□□□□□ -2.38
PCF11O94913 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
PCF11O94913 RNU6-433P-201ENST00000363216 104 ntBASIC0.19□□□□□ -2.38
PCF11O94913 MIR208B-201ENST00000401172 77 ntBASIC0.19□□□□□ -2.38
PCF11O94913 AL355796.1-201ENST00000406706 323 ntBASIC0.19□□□□□ -2.38
PCF11O94913 HMGN2P34-201ENST00000437647 269 ntBASIC0.19□□□□□ -2.38
PCF11O94913 AC023050.3-201ENST00000541142 333 ntBASIC0.19□□□□□ -2.38
PCF11O94913 MTND1P15-201ENST00000579262 949 ntBASIC0.19□□□□□ -2.38
PCF11O94913 AL390123.1-201ENST00000603216 237 ntBASIC0.19□□□□□ -2.38
PCF11O94913 AL359075.3-201ENST00000613288 217 ntBASIC0.19□□□□□ -2.38
PCF11O94913 AL603839.4-201ENST00000624658 1005 ntBASIC0.19□□□□□ -2.38
PCF11O94913 MIR660-201ENST00000385235 97 ntBASIC0.19□□□□□ -2.38
PCF11O94913 RNA5SP504-201ENST00000410676 117 ntBASIC0.19□□□□□ -2.38
PCF11O94913 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.19□□□□□ -2.38
PCF11O94913 MTCO2P12-201ENST00000427426 682 ntBASIC0.19□□□□□ -2.38
PCF11O94913 HSFY7P-201ENST00000432672 318 ntBASIC0.19□□□□□ -2.38
PCF11O94913 HSFY8P-201ENST00000437934 318 ntBASIC0.19□□□□□ -2.38
PCF11O94913 RNU7-94P-201ENST00000459576 63 ntBASIC0.19□□□□□ -2.38
PCF11O94913 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.19□□□□□ -2.38
PCF11O94913 AC073349.3-201ENST00000617616 186 ntBASIC0.19□□□□□ -2.38
PCF11O94913 Y_RNA.287-201ENST00000364853 94 ntBASIC0.18□□□□□ -2.38
PCF11O94913 RNU6-61P-201ENST00000365528 109 ntBASIC0.18□□□□□ -2.38
PCF11O94913 RNU6-1093P-201ENST00000391194 107 ntBASIC0.18□□□□□ -2.38
PCF11O94913 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
PCF11O94913 MRPL42P2-201ENST00000403169 426 ntBASIC0.18□□□□□ -2.38
PCF11O94913 MTATP6P20-201ENST00000414147 562 ntBASIC0.18□□□□□ -2.38
PCF11O94913 RPL37P21-201ENST00000435890 276 ntBASIC0.18□□□□□ -2.38
PCF11O94913 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.18□□□□□ -2.38
PCF11O94913 RPL23AP54-201ENST00000495129 419 ntBASIC0.18□□□□□ -2.38
PCF11O94913 RNU6-1110P-201ENST00000516462 101 ntBASIC0.18□□□□□ -2.38
PCF11O94913 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.18□□□□□ -2.38
PCF11O94913 RNU6-336P-201ENST00000364891 107 ntBASIC0.17□□□□□ -2.38
PCF11O94913 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
PCF11O94913 SNORD116.1-201ENST00000365628 92 ntBASIC0.17□□□□□ -2.38
PCF11O94913 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
PCF11O94913 MIR558-201ENST00000384920 94 ntBASIC0.17□□□□□ -2.38
PCF11O94913 MRPL42P3-201ENST00000401492 326 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AC119618.1-201ENST00000434191 222 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AL031313.1-201ENST00000448435 256 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.17□□□□□ -2.38
PCF11O94913 AL049830.1-201ENST00000468034 425 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AC022616.6-201ENST00000520479 119 ntBASIC0.17□□□□□ -2.38
PCF11O94913 MIR548AX-201ENST00000580117 73 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.17□□□□□ -2.38
PCF11O94913 AC091805.2-201ENST00000603848 235 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AL021368.1-201ENST00000607490 540 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AC097065.2-201ENST00000608159 533 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AC104458.1-201ENST00000608243 463 ntBASIC0.17□□□□□ -2.38
PCF11O94913 AP000484.1-201ENST00000620067 1252 ntBASIC0.17□□□□□ -2.38
PCF11O94913 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
PCF11O94913 Y_RNA.35-201ENST00000362601 101 ntBASIC0.16□□□□□ -2.38
PCF11O94913 Y_RNA.504-201ENST00000384481 104 ntBASIC0.16□□□□□ -2.38
PCF11O94913 RNU6-1257P-201ENST00000384625 110 ntBASIC0.16□□□□□ -2.38
PCF11O94913 MED13P1-201ENST00000428342 171 ntBASIC0.16□□□□□ -2.38
PCF11O94913 AC010486.2-201ENST00000505572 483 ntBASIC0.16□□□□□ -2.38
PCF11O94913 SNORA70.12-201ENST00000516084 153 ntBASIC0.16□□□□□ -2.38
PCF11O94913 RNU6-276P-201ENST00000516114 96 ntBASIC0.16□□□□□ -2.38
PCF11O94913 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.16□□□□□ -2.38
PCF11O94913 AP002001.1-203ENST00000534002 267 ntBASIC0.16□□□□□ -2.38
PCF11O94913 SNORA28-201ENST00000606769 126 ntBASIC0.16□□□□□ -2.38
PCF11O94913 AC097478.2-201ENST00000610572 514 ntBASIC0.16□□□□□ -2.38
PCF11O94913 PART1_2.1-201ENST00000612397 250 ntBASIC0.16□□□□□ -2.38
PCF11O94913 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.16□□□□□ -2.38
PCF11O94913 SNX3P1X-201ENST00000414887 175 ntBASIC0.15□□□□□ -2.38
PCF11O94913 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.15□□□□□ -2.38
PCF11O94913 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.15□□□□□ -2.38
PCF11O94913 AC016717.1-201ENST00000448918 286 ntBASIC0.15□□□□□ -2.38
PCF11O94913 AC116347.2-201ENST00000514912 523 ntBASIC0.15□□□□□ -2.38
PCF11O94913 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
PCF11O94913 AC073539.2-201ENST00000597113 165 ntBASIC0.15□□□□□ -2.38
PCF11O94913 AC080078.2-201ENST00000603766 501 ntBASIC0.15□□□□□ -2.38
PCF11O94913 TCL6_2.1-201ENST00000615162 119 ntBASIC0.15□□□□□ -2.38
PCF11O94913 AL450472.1-202ENST00000637286 180 ntBASIC0.15□□□□□ -2.38
PCF11O94913 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
PCF11O94913 RNU6-428P-201ENST00000362942 107 ntBASIC0.15□□□□□ -2.39
PCF11O94913 RNY3-201ENST00000365484 102 ntBASIC0.15□□□□□ -2.39
PCF11O94913 RNU6-641P-201ENST00000384006 107 ntBASIC0.15□□□□□ -2.39
PCF11O94913 SNORD115.1-201ENST00000391109 76 ntBASIC0.15□□□□□ -2.39
PCF11O94913 AL354692.1-201ENST00000423044 315 ntBASIC0.15□□□□□ -2.39
PCF11O94913 RPL23AP50-201ENST00000434149 455 ntBASIC0.15□□□□□ -2.39
PCF11O94913 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.15□□□□□ -2.39
PCF11O94913 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.15□□□□□ -2.39
PCF11O94913 EEF1A1P39-201ENST00000440791 250 ntBASIC0.15□□□□□ -2.39
PCF11O94913 MTND3P1-201ENST00000441336 220 ntBASIC0.15□□□□□ -2.39
PCF11O94913 STAG3L5P-204ENST00000443759 179 ntBASIC0.15□□□□□ -2.39
PCF11O94913 EXOSC3P1-201ENST00000448649 500 ntBASIC0.15□□□□□ -2.39
PCF11O94913 AC022217.4-201ENST00000604389 163 ntBASIC0.15□□□□□ -2.39
PCF11O94913 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
PCF11O94913 RNU6-1240P-201ENST00000365155 104 ntBASIC0.14□□□□□ -2.39
PCF11O94913 SNAP23P1-201ENST00000433229 246 ntBASIC0.14□□□□□ -2.39
PCF11O94913 AL606517.2-201ENST00000442855 241 ntBASIC0.14□□□□□ -2.39
PCF11O94913 AC093019.1-201ENST00000443135 252 ntBASIC0.14□□□□□ -2.39
PCF11O94913 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.14□□□□□ -2.39
PCF11O94913 RNU6-685P-201ENST00000517088 95 ntBASIC0.14□□□□□ -2.39
PCF11O94913 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms