Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNY1P11-201ENST00000363759 113 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PTCD1O75127 RNU6-381P-201ENST00000391259 108 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 HMGN2P20-201ENST00000437531 273 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.15□□□□□ -1.75
PTCD1O75127 RPS3P1-201ENST00000456781 192 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 RNU7-197P-201ENST00000458836 62 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 SNRPGP3-201ENST00000469405 227 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCD1O75127 AC100767.1-201ENST00000528178 123 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 AC022616.8-201ENST00000533569 253 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCD1O75127 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.15□□□□□ -1.75
PTCD1O75127 MIR7106-201ENST00000612419 65 ntBASIC4.15□□□□□ -1.75
PTCD1O75127 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTCD1O75127 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCD1O75127 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PTCD1O75127 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCD1O75127 RNU6-899P-201ENST00000363947 107 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 U3.40-201ENST00000408706 208 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 EEF1B2P7-201ENST00000451177 676 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 RPL23AP67-201ENST00000465341 474 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.14□□□□□ -1.75
PTCD1O75127 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCD1O75127 RNU6-344P-201ENST00000516635 111 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 RNU2-44P-201ENST00000516795 194 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 CYCSP26-201ENST00000534107 320 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 AC093732.2-201ENST00000607950 274 ntBASIC4.14□□□□□ -1.75
PTCD1O75127 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCD1O75127 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCD1O75127 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCD1O75127 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PTCD1O75127 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.13□□□□□ -1.75
PTCD1O75127 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.13□□□□□ -1.75
PTCD1O75127 AC007256.1-201ENST00000392253 2765 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 Y_RNA.172-201ENST00000363765 102 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 SNORA5B-201ENST00000363786 132 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 RNU6-454P-201ENST00000364292 107 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 snoU2_19.4-201ENST00000364329 80 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 Y_RNA.563-201ENST00000384707 108 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 MIR767-201ENST00000390228 109 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 MIR513C-201ENST00000401352 84 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 U8.19-201ENST00000459095 133 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 SNORA31.1-201ENST00000515993 133 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 SNORA31.5-201ENST00000516190 133 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 RNU2-12P-201ENST00000517216 168 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 AC107934.2-201ENST00000518653 310 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 MIR4431-201ENST00000579990 94 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 DNAJC19P2-201ENST00000593340 302 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 uc_338.32-201ENST00000615087 172 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 AC068205.3-201ENST00000636385 468 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 AC069528.2-201ENST00000624849 1991 ntBASIC4.13□□□□□ -1.75
PTCD1O75127 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCD1O75127 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTCD1O75127 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCD1O75127 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCD1O75127 RNU4-10P-201ENST00000364383 140 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 MIR539-201ENST00000365690 78 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 RNU6-147P-201ENST00000383983 107 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 SNORA7.4-201ENST00000384249 137 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 RNU6-460P-201ENST00000391158 108 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 RNU6-1064P-201ENST00000410626 104 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 AC002075.2-201ENST00000425207 252 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 AC107083.1-201ENST00000439643 279 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 RPS4XP2-201ENST00000458402 793 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 Y_RNA.797-201ENST00000515977 94 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 RNU6-436P-201ENST00000516171 114 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 AC009127.3-201ENST00000570531 403 ntBASIC4.12□□□□□ -1.75
PTCD1O75127 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCD1O75127 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCD1O75127 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCD1O75127 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
PTCD1O75127 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCD1O75127 Y_RNA.572-201ENST00000384757 98 ntBASIC4.11□□□□□ -1.75
PTCD1O75127 SNORA40.19-201ENST00000390846 128 ntBASIC4.11□□□□□ -1.75
PTCD1O75127 SNORA12-201ENST00000391162 147 ntBASIC4.11□□□□□ -1.75
PTCD1O75127 RNA5SP229-201ENST00000410809 99 ntBASIC4.11□□□□□ -1.75
PTCD1O75127 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.11□□□□□ -1.75
PTCD1O75127 MIR2276-201ENST00000516886 89 ntBASIC4.11□□□□□ -1.75
PTCD1O75127 Y_RNA.709-201ENST00000516952 92 ntBASIC4.11□□□□□ -1.75
PTCD1O75127 AC026241.1-201ENST00000517873 2142 ntBASIC4.11□□□□□ -1.75
PTCD1O75127 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCD1O75127 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PTCD1O75127 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PTCD1O75127 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTCD1O75127 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PTCD1O75127 RNU6-755P-201ENST00000364400 103 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 SNORA54-201ENST00000384281 123 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 RNU6-476P-201ENST00000384726 107 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 RNA5SP89-201ENST00000410300 108 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 RNU6-1077P-201ENST00000410506 102 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 Z98742.2-201ENST00000431564 187 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCD1O75127 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCD1O75127 uc_338.14-201ENST00000613162 166 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 AC244205.2-202ENST00000635781 342 ntBASIC4.1□□□□□ -1.75
PTCD1O75127 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms