Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL159169.1-201ENST00000421119 127 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 POLR2KP2-201ENST00000438155 177 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 AC005042.3-201ENST00000453230 174 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.74□□□□□ -1.81
GRIN3BO60391 Y_RNA.650-201ENST00000459002 102 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 RNU6-625P-201ENST00000459412 107 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 AC091179.3-201ENST00000474761 144 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 AC108210.2-201ENST00000503681 201 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 Y_RNA.777-201ENST00000516982 102 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
GRIN3BO60391 Y_RNA.771-201ENST00000598668 102 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 PCGEM1.1-201ENST00000613431 131 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 AC006001.4-201ENST00000622243 395 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 Y_RNA.789-201ENST00000622480 102 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.74□□□□□ -1.81
GRIN3BO60391 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GRIN3BO60391 Y_RNA.304-201ENST00000365011 112 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 Y_RNA.418-201ENST00000384029 102 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 RNA5SP252-201ENST00000391131 119 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 AL133475.1-201ENST00000404414 305 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 RN7SKP192-201ENST00000411291 327 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 NDUFB4P10-201ENST00000452541 359 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 RPS27P26-201ENST00000494583 239 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 AC091959.1-201ENST00000495857 238 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 Y_RNA.662-201ENST00000516028 97 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 RNU6-62P-201ENST00000516526 102 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 SNORA27.4-201ENST00000516650 95 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 RNU6-548P-201ENST00000517083 115 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.73□□□□□ -1.81
GRIN3BO60391 MIR4474-201ENST00000579189 78 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 MIR4679-1-201ENST00000637619 75 ntBASIC3.73□□□□□ -1.81
GRIN3BO60391 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
GRIN3BO60391 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.73□□□□□ -1.81
GRIN3BO60391 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GRIN3BO60391 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GRIN3BO60391 RNU6-1130P-201ENST00000365434 107 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 Y_RNA.353-201ENST00000365440 108 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 AL512633.1-201ENST00000399931 655 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 ELOCP21-201ENST00000412558 336 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 RAB28P5-201ENST00000427490 651 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 RPS4XP2-201ENST00000458402 793 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 AC107934.2-201ENST00000518653 310 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 uc_338.14-201ENST00000613162 166 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.72□□□□□ -1.81
GRIN3BO60391 ZNF658B-202ENST00000615961 3375 ntBASIC3.72□□□□□ -1.81
GRIN3BO60391 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
GRIN3BO60391 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GRIN3BO60391 RNU6-1020P-201ENST00000363684 107 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 Y_RNA.292-201ENST00000364904 97 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 SNORA72.2-201ENST00000365028 127 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 RNU6-1310P-201ENST00000384153 107 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 Y_RNA.498-201ENST00000384460 102 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 SNORD67-201ENST00000390833 111 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 RNU2-61P-201ENST00000411069 191 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 RNU5E-9P-201ENST00000411164 104 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 RPL19P1-201ENST00000411635 428 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 AL035461.1-201ENST00000421490 332 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.71□□□□□ -1.82
GRIN3BO60391 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.71□□□□□ -1.82
GRIN3BO60391 AC114982.1-201ENST00000469402 321 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 AC021205.2-201ENST00000480069 347 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 AC103975.1-201ENST00000482506 483 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 AC140059.1-201ENST00000489238 361 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 MIR2276-201ENST00000516886 89 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.71□□□□□ -1.82
GRIN3BO60391 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.71□□□□□ -1.82
GRIN3BO60391 AC055872.1-201ENST00000570978 278 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 AC096644.4-201ENST00000563417 2912 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 AP003122.5-201ENST00000527668 3766 ntBASIC3.71□□□□□ -1.82
GRIN3BO60391 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GRIN3BO60391 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.7□□□□□ -1.82
GRIN3BO60391 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GRIN3BO60391 MIR30E-201ENST00000362104 92 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 RNU6-1210P-201ENST00000363775 107 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 Y_RNA.233-201ENST00000364407 101 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 Y_RNA.586-201ENST00000391146 98 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 Y_RNA.590-201ENST00000410140 107 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 MRPS10P1-201ENST00000448483 130 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 RPS3P1-201ENST00000456781 192 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 SNORD2.1-201ENST00000458762 69 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 RPL23AP70-201ENST00000483361 460 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 RNU6-1219P-201ENST00000516143 112 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 EIF4A1P12-201ENST00000551910 141 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.7□□□□□ -1.82
GRIN3BO60391 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.7□□□□□ -1.82
GRIN3BO60391 AC025754.2-201ENST00000606491 432 ntBASIC3.7□□□□□ -1.82
GRIN3BO60391 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.7□□□□□ -1.82
GRIN3BO60391 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
GRIN3BO60391 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GRIN3BO60391 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GRIN3BO60391 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
GRIN3BO60391 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GRIN3BO60391 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.7□□□□□ -1.82
GRIN3BO60391 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GRIN3BO60391 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GRIN3BO60391 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
GRIN3BO60391 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GRIN3BO60391 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms