Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.57□□□□□ -2
NPC1O15118 MIR4680-201ENST00000580906 66 ntBASIC2.57□□□□□ -2
NPC1O15118 AC104695.3-201ENST00000604052 296 ntBASIC2.57□□□□□ -2
NPC1O15118 AL162373.1-201ENST00000620433 407 ntBASIC2.57□□□□□ -2
NPC1O15118 AC064859.1-201ENST00000624741 174 ntBASIC2.57□□□□□ -2
NPC1O15118 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPC1O15118 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPC1O15118 RNU6-1301P-201ENST00000362724 104 ntBASIC2.56□□□□□ -2
NPC1O15118 Y_RNA.162-201ENST00000363683 102 ntBASIC2.56□□□□□ -2
NPC1O15118 RNU6-438P-201ENST00000365561 103 ntBASIC2.56□□□□□ -2
NPC1O15118 RNU1-148P-201ENST00000384472 162 ntBASIC2.56□□□□□ -2
NPC1O15118 MIR592-201ENST00000384959 97 ntBASIC2.56□□□□□ -2
NPC1O15118 AL359511.1-201ENST00000402970 211 ntBASIC2.56□□□□□ -2
NPC1O15118 SRIP3-201ENST00000413200 219 ntBASIC2.56□□□□□ -2
NPC1O15118 EDDM3CP-201ENST00000415977 425 ntBASIC2.56□□□□□ -2
NPC1O15118 RNU7-14P-201ENST00000459331 62 ntBASIC2.56□□□□□ -2
NPC1O15118 AC093852.1-201ENST00000503587 266 ntBASIC2.56□□□□□ -2
NPC1O15118 RNU6-1098P-201ENST00000516772 96 ntBASIC2.56□□□□□ -2
NPC1O15118 RNA5SP490-201ENST00000517141 136 ntBASIC2.56□□□□□ -2
NPC1O15118 DEFB131C-201ENST00000528817 165 ntBASIC2.56□□□□□ -2
NPC1O15118 AC040926.1-201ENST00000530195 238 ntBASIC2.56□□□□□ -2
NPC1O15118 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.56□□□□□ -2
NPC1O15118 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.56□□□□□ -2
NPC1O15118 SNORD53-201ENST00000579969 78 ntBASIC2.56□□□□□ -2
NPC1O15118 AC125232.2-201ENST00000592457 143 ntBASIC2.56□□□□□ -2
NPC1O15118 RPS29P30-201ENST00000600975 111 ntBASIC2.56□□□□□ -2
NPC1O15118 Y_RNA.27-201ENST00000362540 103 ntBASIC2.55□□□□□ -2
NPC1O15118 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
NPC1O15118 Y_RNA.389-201ENST00000383924 113 ntBASIC2.55□□□□□ -2
NPC1O15118 SNORA70B-201ENST00000384210 135 ntBASIC2.55□□□□□ -2
NPC1O15118 RNU6-708P-201ENST00000384217 107 ntBASIC2.55□□□□□ -2
NPC1O15118 RNY3P4-201ENST00000384428 101 ntBASIC2.55□□□□□ -2
NPC1O15118 MIR518C-201ENST00000384822 101 ntBASIC2.55□□□□□ -2
NPC1O15118 RNU6-101P-201ENST00000410323 104 ntBASIC2.55□□□□□ -2
NPC1O15118 RNU6-1001P-201ENST00000411265 100 ntBASIC2.55□□□□□ -2
NPC1O15118 AC009237.7-201ENST00000447357 229 ntBASIC2.55□□□□□ -2
NPC1O15118 AL137159.1-201ENST00000452808 512 ntBASIC2.55□□□□□ -2
NPC1O15118 TRBV12-1-201ENST00000479785 344 ntBASIC2.55□□□□□ -2
NPC1O15118 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.55□□□□□ -2
NPC1O15118 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
NPC1O15118 RNU6-1137P-201ENST00000517073 99 ntBASIC2.55□□□□□ -2
NPC1O15118 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
NPC1O15118 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.55□□□□□ -2
NPC1O15118 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
NPC1O15118 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
NPC1O15118 AC010999.1-201ENST00000611856 324 ntBASIC2.55□□□□□ -2
NPC1O15118 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
NPC1O15118 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
NPC1O15118 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPC1O15118 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPC1O15118 RNU1-62P-201ENST00000362599 164 ntBASIC2.54□□□□□ -2
NPC1O15118 RNA5SP361-201ENST00000362686 118 ntBASIC2.54□□□□□ -2
NPC1O15118 Y_RNA.179-201ENST00000363844 90 ntBASIC2.54□□□□□ -2
NPC1O15118 SNORA63C-201ENST00000364578 129 ntBASIC2.54□□□□□ -2
NPC1O15118 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
NPC1O15118 RNU6-318P-201ENST00000384283 103 ntBASIC2.54□□□□□ -2
NPC1O15118 Y_RNA.527-201ENST00000384573 102 ntBASIC2.54□□□□□ -2
NPC1O15118 RNU6-823P-201ENST00000391042 103 ntBASIC2.54□□□□□ -2
NPC1O15118 MIR300-201ENST00000401138 83 ntBASIC2.54□□□□□ -2
NPC1O15118 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.54□□□□□ -2
NPC1O15118 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.54□□□□□ -2
NPC1O15118 AC011753.1-201ENST00000451001 220 ntBASIC2.54□□□□□ -2
NPC1O15118 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.54□□□□□ -2
NPC1O15118 PRELID3BP1-201ENST00000457142 540 ntBASIC2.54□□□□□ -2
NPC1O15118 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.54□□□□□ -2
NPC1O15118 RN7SKP49-201ENST00000516675 260 ntBASIC2.54□□□□□ -2
NPC1O15118 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.54□□□□□ -2
NPC1O15118 AC022616.4-201ENST00000522985 181 ntBASIC2.54□□□□□ -2
NPC1O15118 AC124312.5-201ENST00000604451 268 ntBASIC2.54□□□□□ -2
NPC1O15118 AL360085.1-201ENST00000604713 532 ntBASIC2.54□□□□□ -2
NPC1O15118 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NPC1O15118 SNORD31B-201ENST00000364977 69 ntBASIC2.53□□□□□ -2
NPC1O15118 Y_RNA.455-201ENST00000384230 98 ntBASIC2.53□□□□□ -2
NPC1O15118 RNU6-793P-201ENST00000384233 104 ntBASIC2.53□□□□□ -2
NPC1O15118 SNORA51.11-201ENST00000384442 131 ntBASIC2.53□□□□□ -2
NPC1O15118 RNU6-738P-201ENST00000384531 106 ntBASIC2.53□□□□□ -2
NPC1O15118 MIR329-1-201ENST00000385028 80 ntBASIC2.53□□□□□ -2
NPC1O15118 RNU6-985P-201ENST00000410182 104 ntBASIC2.53□□□□□ -2
NPC1O15118 AC004866.1-201ENST00000411748 78 ntBASIC2.53□□□□□ -2
NPC1O15118 AC009963.1-201ENST00000417265 157 ntBASIC2.53□□□□□ -2
NPC1O15118 AL356320.1-201ENST00000429616 163 ntBASIC2.53□□□□□ -2
NPC1O15118 HMGN2P18-201ENST00000450680 270 ntBASIC2.53□□□□□ -2
NPC1O15118 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.53□□□□□ -2
NPC1O15118 AC093259.1-201ENST00000509755 300 ntBASIC2.53□□□□□ -2
NPC1O15118 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.53□□□□□ -2
NPC1O15118 AC008413.1-201ENST00000511864 177 ntBASIC2.53□□□□□ -2
NPC1O15118 RNU6-344P-201ENST00000516635 111 ntBASIC2.53□□□□□ -2
NPC1O15118 RNA5SP137-201ENST00000516833 135 ntBASIC2.53□□□□□ -2
NPC1O15118 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.53□□□□□ -2
NPC1O15118 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.53□□□□□ -2
NPC1O15118 AC016717.2-201ENST00000609089 5141 ntBASIC2.53□□□□□ -2
NPC1O15118 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPC1O15118 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.52□□□□□ -2.01
NPC1O15118 RNU4-50P-201ENST00000364361 141 ntBASIC2.52□□□□□ -2.01
NPC1O15118 RNU6-450P-201ENST00000364654 107 ntBASIC2.52□□□□□ -2.01
NPC1O15118 RNU6-1145P-201ENST00000384246 107 ntBASIC2.52□□□□□ -2.01
NPC1O15118 SNORA40.19-201ENST00000390846 128 ntBASIC2.52□□□□□ -2.01
NPC1O15118 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
NPC1O15118 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.52□□□□□ -2.01
NPC1O15118 AC113618.1-201ENST00000416747 285 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms