Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RNA5SP109-201ENST00000391010 116 ntBASIC1□□□□□ -2.25
AP3B1O00203 RNA5SP467-201ENST00000391274 118 ntBASIC1□□□□□ -2.25
AP3B1O00203 FGF7P8-201ENST00000402994 292 ntBASIC1□□□□□ -2.25
AP3B1O00203 AL663109.1-201ENST00000411498 844 ntBASIC1□□□□□ -2.25
AP3B1O00203 RPL23AP36-201ENST00000413895 458 ntBASIC1□□□□□ -2.25
AP3B1O00203 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1□□□□□ -2.25
AP3B1O00203 RNU1-142P-201ENST00000516682 145 ntBASIC1□□□□□ -2.25
AP3B1O00203 Y_RNA.695-201ENST00000516715 107 ntBASIC1□□□□□ -2.25
AP3B1O00203 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1□□□□□ -2.25
AP3B1O00203 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1□□□□□ -2.25
AP3B1O00203 AL157687.1-201ENST00000554853 619 ntBASIC1□□□□□ -2.25
AP3B1O00203 TPRKBP2-201ENST00000565969 475 ntBASIC1□□□□□ -2.25
AP3B1O00203 MIR5692C1-201ENST00000585309 91 ntBASIC1□□□□□ -2.25
AP3B1O00203 AC146944.4-201ENST00000602697 718 ntBASIC1□□□□□ -2.25
AP3B1O00203 SNRPGP20-201ENST00000604477 205 ntBASIC1□□□□□ -2.25
AP3B1O00203 AL357078.3-201ENST00000607528 618 ntBASIC1□□□□□ -2.25
AP3B1O00203 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1□□□□□ -2.25
AP3B1O00203 AC007684.1-201ENST00000609671 477 ntBASIC1□□□□□ -2.25
AP3B1O00203 AL121757.2-201ENST00000611223 313 ntBASIC1□□□□□ -2.25
AP3B1O00203 AC068792.1-201ENST00000621354 417 ntBASIC1□□□□□ -2.25
AP3B1O00203 TTK-211ENST00000627129 240 ntTSL 5 BASIC1□□□□□ -2.25
AP3B1O00203 OR5AK4P-201ENST00000635912 903 ntBASIC1□□□□□ -2.25
AP3B1O00203 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
AP3B1O00203 Y_RNA.378-201ENST00000365652 113 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 SNORA67.2-201ENST00000384300 149 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 RNY3P9-201ENST00000384727 106 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 RNU6-1031P-201ENST00000384773 107 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 AL049545.1-201ENST00000401856 572 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 RNU6-57P-201ENST00000411348 103 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.99□□□□□ -2.25
AP3B1O00203 AC016909.1-201ENST00000415916 166 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 AC008134.1-201ENST00000420943 193 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.99□□□□□ -2.25
AP3B1O00203 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.99□□□□□ -2.25
AP3B1O00203 RNU7-57P-201ENST00000459540 60 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 HMGB1P29-201ENST00000505659 499 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 RNU6-165P-201ENST00000517170 99 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.99□□□□□ -2.25
AP3B1O00203 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.99□□□□□ -2.25
AP3B1O00203 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.99□□□□□ -2.25
AP3B1O00203 AC073648.5-201ENST00000603502 305 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 snoU13.31-201ENST00000607291 104 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 AL359757.2-201ENST00000624309 274 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 SCARNA4-201ENST00000629045 128 ntBASIC0.99□□□□□ -2.25
AP3B1O00203 Y_RNA.1-201ENST00000352915 104 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
AP3B1O00203 Y_RNA.327-201ENST00000365201 102 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 RNU6-38P-201ENST00000384085 107 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 MIR19B1-201ENST00000384829 87 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
AP3B1O00203 RNU6-325P-201ENST00000411132 105 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.98□□□□□ -2.25
AP3B1O00203 AC092447.3-201ENST00000426027 686 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 RAB28P5-201ENST00000427490 651 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 AL359672.1-201ENST00000442302 409 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 AL606517.2-201ENST00000442855 241 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 RPS27P1-201ENST00000450552 247 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 AC092436.3-201ENST00000511788 257 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 SCARNA16.2-201ENST00000516520 172 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.98□□□□□ -2.25
AP3B1O00203 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
AP3B1O00203 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.98□□□□□ -2.25
AP3B1O00203 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.98□□□□□ -2.25
AP3B1O00203 CPDP1-201ENST00000579660 283 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 AL158063.1-201ENST00000615349 536 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 AC008873.1-201ENST00000625051 138 ntBASIC0.98□□□□□ -2.25
AP3B1O00203 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
AP3B1O00203 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 RNU6-784P-201ENST00000384330 106 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 MIR487A-201ENST00000385009 80 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 SNORD37.1-201ENST00000390968 65 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 MIR450B-201ENST00000401182 78 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.97□□□□□ -2.25
AP3B1O00203 Z82205.1-201ENST00000428456 297 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 TIMM9P3-201ENST00000428659 274 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.97□□□□□ -2.25
AP3B1O00203 SRRM1P2-201ENST00000464531 1192 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 RPS3AP17-201ENST00000472594 777 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 RNA5SP401-201ENST00000515920 127 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 AL513534.2-201ENST00000603836 250 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 AC097065.2-201ENST00000608159 533 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 MIR8076-201ENST00000611401 83 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 AL359075.3-201ENST00000613288 217 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 AL078596.1-201ENST00000624856 447 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 AL133216.2-202ENST00000634512 349 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 U6.108-201ENST00000637764 58 ntBASIC0.97□□□□□ -2.25
AP3B1O00203 Y_RNA.296-201ENST00000364930 108 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 RNU4-66P-201ENST00000365199 138 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 RNU4-20P-201ENST00000365601 151 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 AC010154.1-201ENST00000425857 269 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 RNU6-956P-201ENST00000458868 103 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 Y_RNA.654-201ENST00000497848 106 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 SNORA19.2-201ENST00000516013 114 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 SNORA31.10-201ENST00000516482 106 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 RNU6-344P-201ENST00000516635 111 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 AC025647.1-201ENST00000517879 253 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 MTND1P35-201ENST00000526739 508 ntBASIC0.96□□□□□ -2.26
AP3B1O00203 AC121247.2-201ENST00000604776 136 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms