Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 Y_RNA.570-201ENST00000384750 101 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 MIR586-201ENST00000385035 97 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 MT-TG-201ENST00000387429 68 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 Y_RNA.581-201ENST00000391017 97 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 RNU5A-5P-201ENST00000411054 116 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 RPL21P38-201ENST00000418090 167 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 Z96811.1-201ENST00000445880 108 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 RNU6-408P-201ENST00000515910 100 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 RNU6-1098P-201ENST00000516772 96 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 AC022616.8-201ENST00000533569 253 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CCDC85CA6NKD9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 Y_RNA.122-201ENST00000363331 96 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 RNU6-234P-201ENST00000365229 104 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 Y_RNA.396-201ENST00000383949 103 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 Y_RNA.415-201ENST00000384012 112 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 Y_RNA.461-201ENST00000384263 103 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 RNU6-937P-201ENST00000384325 106 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 MIR1302-6-201ENST00000408466 90 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 RNU2-63P-201ENST00000410792 194 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 AC002075.2-201ENST00000425207 252 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 RNU6-625P-201ENST00000459412 107 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 RN7SL499P-201ENST00000481141 276 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 MIR3117-201ENST00000584034 78 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 AL449363.1-201ENST00000617815 186 ntBASIC3.31□□□□□ -1.88
CCDC85CA6NKD9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 snoU2_19.2-201ENST00000363024 80 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 SNORD81.1-201ENST00000363064 77 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 RNU6-626P-201ENST00000363354 107 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 RNU6-1264P-201ENST00000383891 107 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 RNU6-20P-201ENST00000384106 107 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 MT-TW-201ENST00000387382 68 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 AL033519.2-201ENST00000403958 392 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 RAB28P5-201ENST00000427490 651 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 AL445687.1-201ENST00000439946 251 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 HMGN2P23-201ENST00000456759 269 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 AC090616.3-201ENST00000582184 217 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 AC127459.3-201ENST00000624328 466 ntBASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CCDC85CA6NKD9 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 Y_RNA.84-201ENST00000363011 104 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 RNU6-727P-201ENST00000363592 107 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 U3.8-201ENST00000363675 217 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 MIR27B-201ENST00000385129 97 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 MIR300-201ENST00000401138 83 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 RNU6-1203P-201ENST00000410703 110 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 RNU4-53P-201ENST00000410828 140 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 AC139712.2-201ENST00000424302 339 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 AC092427.1-202ENST00000430569 476 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 RNU6-496P-201ENST00000516145 99 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 AC109329.2-201ENST00000519658 482 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 AC092628.2-201ENST00000622492 339 ntBASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC85CA6NKD9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 AC009487.4-201ENST00000624969 3585 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 RNU6-546P-201ENST00000383991 107 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 RNU2-48P-201ENST00000410694 191 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 Y_RNA.618-201ENST00000410949 107 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 RNU2-25P-201ENST00000411041 191 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 AC096920.1-201ENST00000423991 241 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 AC107934.2-201ENST00000518653 310 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 AC005176.2-201ENST00000596933 147 ntBASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC85CA6NKD9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CCDC85CA6NKD9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC85CA6NKD9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC85CA6NKD9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC85CA6NKD9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC85CA6NKD9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC85CA6NKD9 RNU1-23P-201ENST00000363361 144 ntBASIC3.27□□□□□ -1.89
CCDC85CA6NKD9 SNORD113-8-201ENST00000363497 74 ntBASIC3.27□□□□□ -1.89
CCDC85CA6NKD9 Y_RNA.288-201ENST00000364854 92 ntBASIC3.27□□□□□ -1.89
CCDC85CA6NKD9 RNU6-1310P-201ENST00000384153 107 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms