Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MIR449C-201ENST00000516047 92 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 RNU5F-4P-201ENST00000516581 114 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.713-201ENST00000517013 96 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AL117187.1-201ENST00000555482 181 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AC233702.2-202ENST00000562547 291 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 MIR4659A-201ENST00000580269 81 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AC008873.1-201ENST00000625051 138 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 MIR1248-201ENST00000629190 106 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.152-201ENST00000363578 100 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.459-201ENST00000384251 102 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.471-201ENST00000384312 102 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 AC010655.3-201ENST00000478818 450 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 RPL26P26-201ENST00000480251 434 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-1046P-201ENST00000516538 107 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 AC021269.2-201ENST00000532318 330 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 AL357075.2-201ENST00000614906 189 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 AC068205.3-201ENST00000636385 468 ntBASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TCRBV7S3A2A0A539 SNORD31B-201ENST00000364977 69 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-1105P-201ENST00000384774 107 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 MIR586-201ENST00000385035 97 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 MIR300-201ENST00000401138 83 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 SNORA11.1-201ENST00000408133 129 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-130P-201ENST00000411112 103 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 NDUFB4P10-201ENST00000452541 359 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AC234781.5-201ENST00000508429 271 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 ATP5EP1-201ENST00000510257 156 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 SNORA40.9-201ENST00000515895 93 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-965P-201ENST00000516721 96 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AC131281.1-201ENST00000522984 164 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 RRN3P3-201ENST00000549207 578 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 RAC1P9-201ENST00000604990 392 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 PRR13P7-201ENST00000605538 430 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AL162730.1-201ENST00000605734 292 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.772-201ENST00000606692 102 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.35□□□□□ -2.03
TCRBV7S3A2A0A539 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 MIR410-201ENST00000362222 80 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.133-201ENST00000363428 110 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.183-201ENST00000363882 113 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 SNORA25B-201ENST00000365507 128 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 AL033519.2-201ENST00000403958 392 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 ELOCP21-201ENST00000412558 336 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 RNU7-14P-201ENST00000459331 62 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 NDUFA5P6-201ENST00000542110 379 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 AK6P2-201ENST00000549020 471 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TCRBV7S3A2A0A539 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.214-201ENST00000364201 112 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.415-201ENST00000384012 112 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.439-201ENST00000384119 94 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-1072P-201ENST00000384703 107 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-443P-201ENST00000384780 107 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 RPL21P1-201ENST00000399532 476 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 DPH3P2-201ENST00000422618 250 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms