Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 RNU6-728P-201ENST00000365375 104 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 RNA5SP167-201ENST00000365461 116 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 RNY4P18-201ENST00000391107 89 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 RNA5SP239-201ENST00000410218 129 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 RNU6-1064P-201ENST00000410626 104 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 AC012493.2-201ENST00000595083 291 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 AC091152.3-201ENST00000604227 325 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 AL110115.1-201ENST00000614396 364 ntBASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX11Q9Y5W9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SNX11Q9Y5W9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.46□□□□□ -1.85
SNX11Q9Y5W9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 RNU1-75P-201ENST00000347264 129 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 MIR367-201ENST00000362299 68 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 Y_RNA.294-201ENST00000364916 102 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 U8.7-201ENST00000364940 136 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 SNORA1.3-201ENST00000384676 136 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 RNU6-1228P-201ENST00000391014 107 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 TOMM22P2-201ENST00000430735 237 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AC117454.1-201ENST00000491120 168 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AC093663.1-201ENST00000497190 394 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AC099778.2-201ENST00000610904 211 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AP003355.3-201ENST00000623465 114 ntBASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX11Q9Y5W9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 RNU6-1298P-201ENST00000362456 101 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 RNU6-283P-201ENST00000364788 107 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 MIR548B-201ENST00000385247 97 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 SNORA48.5-201ENST00000391143 135 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 AL512604.1-201ENST00000404812 257 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 RPS29P31-201ENST00000446147 164 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 AL645939.1-201ENST00000453429 797 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 IGKV2-26-201ENST00000518305 343 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 MIR3646-201ENST00000578301 84 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 MIR4738-201ENST00000579134 87 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 AC110741.2-201ENST00000605278 268 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 AC025754.2-201ENST00000606491 432 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 AP001340.1-201ENST00000624405 217 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 CEP170P1-201ENST00000502249 4587 ntBASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SNX11Q9Y5W9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 SNORA31-201ENST00000362607 130 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 RNU6-235P-201ENST00000362644 107 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 SNORD114-19-201ENST00000363072 75 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 RNU6-915P-201ENST00000364943 103 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 Y_RNA.563-201ENST00000384707 108 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 RNU2-49P-201ENST00000410666 184 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 AIMP1P2-201ENST00000425294 312 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 AL365496.1-201ENST00000426885 215 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 Z75741.1-201ENST00000446793 314 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 RPS27P1-201ENST00000450552 247 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 AP001486.1-201ENST00000463339 476 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 AL049873.1-201ENST00000480540 376 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 MIR3609-201ENST00000582661 80 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 HSPE1P7-201ENST00000604681 321 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 U7.2-201ENST00000607576 63 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 AC012640.5-201ENST00000623897 319 ntBASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX11Q9Y5W9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SNX11Q9Y5W9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX11Q9Y5W9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX11Q9Y5W9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
SNX11Q9Y5W9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.43□□□□□ -1.86
SNX11Q9Y5W9 Y_RNA.393-201ENST00000383936 102 ntBASIC3.43□□□□□ -1.86
SNX11Q9Y5W9 SNORA67.2-201ENST00000384300 149 ntBASIC3.43□□□□□ -1.86
SNX11Q9Y5W9 RNU6-476P-201ENST00000384726 107 ntBASIC3.43□□□□□ -1.86
SNX11Q9Y5W9 SNORA12-201ENST00000391162 147 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms