Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 AC016925.1-201ENST00000458303 298 ntBASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 RPS27P22-201ENST00000478056 241 ntBASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 MRPS36P2-201ENST00000512569 299 ntBASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-63P-201ENST00000516690 95 ntBASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 AC018630.3-201ENST00000542637 96 ntBASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 AC013412.1-201ENST00000610687 192 ntBASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 SNORD6-201ENST00000365444 73 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-418P-201ENST00000384035 107 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 AL162151.2-201ENST00000448875 158 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 AC080013.2-201ENST00000460866 323 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 RN7SL860P-201ENST00000473738 223 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 YWHAEP4-201ENST00000505390 198 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 FCF1P8-201ENST00000510322 597 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 Y_RNA.692-201ENST00000516627 105 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 AC015720.1-201ENST00000565251 277 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 RN7SL600P-201ENST00000581811 299 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 AL591424.2-201ENST00000617023 128 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 IPO8P1-201ENST00000455509 3109 ntBASIC3.86□□□□□ -1.79
PCDHGA11Q9Y5H2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 AC016397.1-201ENST00000412463 242 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU7-107P-201ENST00000459121 61 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 Y_RNA.712-201ENST00000517011 92 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 MRPL49P2-201ENST00000521066 465 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 CYCSP29-201ENST00000533731 318 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 MIR3939-201ENST00000582614 106 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 AL049861.1-201ENST00000603130 150 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 AL021707.8-201ENST00000609428 183 ntBASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PCDHGA11Q9Y5H2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 RNA5SP139-201ENST00000364340 117 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 SNORA26-201ENST00000391286 122 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 RN7SL93P-201ENST00000463035 293 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 AC010618.1-201ENST00000469924 477 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 SNORA31.9-201ENST00000516429 84 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 RNA5SP153-201ENST00000516498 76 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 MIR6868-201ENST00000611215 58 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 MIR6716-201ENST00000613413 80 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.84□□□□□ -1.79
PCDHGA11Q9Y5H2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGA11Q9Y5H2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.84□□□□□ -1.8
PCDHGA11Q9Y5H2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGA11Q9Y5H2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 SNORD18B-201ENST00000365659 72 ntBASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-476P-201ENST00000384726 107 ntBASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RPS26P8-201ENST00000393490 348 ntBASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU2-70P-201ENST00000410718 179 ntBASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 AL357134.1-201ENST00000445848 426 ntBASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RPS29P21-201ENST00000496272 170 ntBASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-126P-201ENST00000516685 103 ntBASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA11Q9Y5H2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 AC091564.4-201ENST00000533934 2194 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 Y_RNA.120-201ENST00000363304 110 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 RNY1P11-201ENST00000363759 113 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 Y_RNA.203-201ENST00000364106 102 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-117P-201ENST00000365415 107 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 SNORA56-201ENST00000383966 129 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-484P-201ENST00000384016 107 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 RN7SKP202-201ENST00000410439 330 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 CYCSP49-201ENST00000420810 319 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 RPL30P4-201ENST00000429309 333 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 AC083863.1-201ENST00000438811 231 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 AC090515.1-201ENST00000465295 476 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms