Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC010099.1-201ENST00000455434 375 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 SNRPGP5-201ENST00000456003 220 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 RNA5SP310-201ENST00000459084 116 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 RNA5SP249-201ENST00000516127 99 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU2-34P-201ENST00000516534 121 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 CYCSP40-201ENST00000575927 294 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 AC090517.3-201ENST00000625170 141 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 MAPK10-253ENST00000641010 4072 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 USP8P1-201ENST00000494673 3183 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU1-20P-201ENST00000363314 162 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 SNORD113.2-201ENST00000364166 89 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 RN7SKP27-201ENST00000410684 333 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 AL645608.4-201ENST00000423619 154 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 AC004975.1-201ENST00000428733 208 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU2-35P-201ENST00000516446 142 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR5699-201ENST00000578903 90 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR1254-2-201ENST00000579553 63 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 AL356218.2-201ENST00000605264 187 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 AC140113.4-201ENST00000622087 222 ntBASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU6-363P-201ENST00000362895 105 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU1-72P-201ENST00000362976 153 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU6-409P-201ENST00000384114 104 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR129-1-201ENST00000384972 72 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR1193-201ENST00000408109 78 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 Y_RNA.620-201ENST00000411009 88 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 AC016831.4-201ENST00000438302 307 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 AC091153.1-201ENST00000466297 402 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 SCARNA22-201ENST00000503991 125 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 AL592156.1-201ENST00000508758 304 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 SCGB1D5P-201ENST00000515134 247 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 Vault.1-201ENST00000516474 102 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 Y_RNA.714-201ENST00000517065 90 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 AC093249.4-201ENST00000564755 259 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR3618-201ENST00000580330 88 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR4668-201ENST00000582284 70 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR4777-201ENST00000583710 86 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 FAM27B-201ENST00000610601 213 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 AL110115.1-201ENST00000614396 364 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 AC087741.2-201ENST00000619415 172 ntBASIC4.59□□□□□ -1.67
PCDHGA4Q9Y5G9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHGA4Q9Y5G9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHGA4Q9Y5G9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
PCDHGA4Q9Y5G9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU6-661P-201ENST00000362409 107 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 SNORD45B-201ENST00000364617 72 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU6-652P-201ENST00000365488 107 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR548O-201ENST00000408583 114 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 CKS1BP6-201ENST00000424932 240 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 AC010401.1-201ENST00000463867 348 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU1-6P-201ENST00000516290 144 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 Y_RNA.705-201ENST00000516862 110 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR4778-201ENST00000577635 80 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 uc_338.14-201ENST00000613162 166 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 AC068724.3-201ENST00000625906 87 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 AL136164.3-201ENST00000624429 3978 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 ZNF271P-202ENST00000465539 1970 ntBASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA4Q9Y5G9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 AL672167.1-203ENST00000641299 2975 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 SNORD74.4-201ENST00000364129 80 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 RNA5SP189-201ENST00000364920 115 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 DBIP2-201ENST00000419076 262 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 AC099677.2-201ENST00000436385 175 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 AC233266.1-201ENST00000454518 96 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 AP002884.2-201ENST00000471647 395 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 AC242852.1-201ENST00000612151 96 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 AC244015.1-201ENST00000622301 99 ntBASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA4Q9Y5G9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms