Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 ZNF861P-201ENST00000588126 639 ntBASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 MZT1P2-201ENST00000604387 248 ntBASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 AC025754.2-201ENST00000606491 432 ntBASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 MIR1302-2-201ENST00000607096 138 ntBASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 MIR3670-4-201ENST00000612260 65 ntBASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 AC068205.3-201ENST00000636385 468 ntBASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 MTND5P35-201ENST00000557537 1720 ntBASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LSM4Q9Y4Z0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 RNU6-1301P-201ENST00000362724 104 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 RNU6-308P-201ENST00000390957 107 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 MIR1262-201ENST00000408276 93 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AL163540.1-201ENST00000485382 386 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 SNORA40.14-201ENST00000516543 86 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 RNU6-1153P-201ENST00000516760 105 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 Y_RNA.711-201ENST00000516993 102 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 GNAI2P1-201ENST00000541815 315 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC004486.1-201ENST00000546846 233 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC006600.1-201ENST00000572529 153 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 MIR3171-201ENST00000584270 74 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC022202.1-201ENST00000613515 211 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC083806.3-201ENST00000614016 455 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 AC007485.1-201ENST00000616755 206 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 IGHVIII-44-202ENST00000636235 289 ntBASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.18□□□□□ -2.06
LSM4Q9Y4Z0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 RNY3P4-201ENST00000384428 101 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 MIR628-201ENST00000385229 95 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 AL139095.1-201ENST00000404326 391 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 RNA5SP504-201ENST00000410676 117 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 AC087499.2-201ENST00000432861 149 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 AL139109.1-201ENST00000455491 297 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 RNU1-104P-201ENST00000517280 175 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 MIR4753-201ENST00000585119 83 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 SNORD14A-201ENST00000606526 91 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 SNORD58B-201ENST00000607313 66 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 AC008873.1-201ENST00000625051 138 ntBASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.17□□□□□ -2.06
LSM4Q9Y4Z0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 RNA5SP361-201ENST00000362686 118 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 Y_RNA.132-201ENST00000363421 102 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 Y_RNA.202-201ENST00000364083 110 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 SNORA25.6-201ENST00000364121 118 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 RNU6-1011P-201ENST00000384668 107 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 SNORA40.19-201ENST00000390846 128 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 OOSP1P1-201ENST00000423265 274 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 AL160004.2-201ENST00000432935 350 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 MTCO1P44-201ENST00000441935 243 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 IFNA11P-201ENST00000446352 526 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 PCNPP5-201ENST00000452246 481 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 AC114982.1-201ENST00000469402 321 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 AC093852.1-201ENST00000503587 266 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 AC074133.1-201ENST00000515696 183 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 MIR5188-201ENST00000583467 113 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 AC104984.5-201ENST00000586878 94 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LSM4Q9Y4Z0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
LSM4Q9Y4Z0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
LSM4Q9Y4Z0 ZNF72P-201ENST00000425869 1908 ntBASIC2.15□□□□□ -2.06
LSM4Q9Y4Z0 Y_RNA.27-201ENST00000362540 103 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.80-201ENST00000362996 102 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-727P-201ENST00000363592 107 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 U3.8-201ENST00000363675 217 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 SNORA22B-201ENST00000383876 138 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 SNORD14D-201ENST00000384390 87 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.485-201ENST00000384395 102 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms