Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RN7SKP61-201ENST00000410642 295 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 RNU2-55P-201ENST00000411146 174 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 AC098614.2-201ENST00000426040 255 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 NDUFB4P6-201ENST00000436819 366 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 RN7SL601P-201ENST00000471221 293 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 RPL31P41-201ENST00000477967 372 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 AC117454.1-201ENST00000491120 168 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 RNU2-58P-201ENST00000516403 183 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 RNU6-107P-201ENST00000516643 102 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 AC005000.2-201ENST00000605468 310 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 AC058791.1-201ENST00000608412 3198 ntBASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 RNA5SP189-201ENST00000364920 115 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 RNU6-1240P-201ENST00000365155 104 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 RNU6-979P-201ENST00000383896 107 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 RNU6-1080P-201ENST00000383982 107 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 RN7SKP101-201ENST00000411376 320 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 CYCSP4-201ENST00000429682 331 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 AC007969.2-201ENST00000441891 191 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 AC005921.1-201ENST00000510589 286 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 RN7SKP289-201ENST00000517244 295 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 AP004607.1-201ENST00000524456 203 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 AC068339.1-201ENST00000526965 141 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 AC025946.2-201ENST00000603398 234 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 AL137849.1-201ENST00000604767 169 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 MIR548AY-201ENST00000617669 107 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 AL133383.2-201ENST00000622958 2336 ntBASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PDZRN3Q9UPQ7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 RNU6-1249P-201ENST00000363237 111 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 Y_RNA.290-201ENST00000364879 114 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 Y_RNA.362-201ENST00000365518 110 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 MIR181B1-201ENST00000385240 110 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 Z85995.1-201ENST00000415547 335 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 AC002075.2-201ENST00000425207 252 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 HMGN2P21-201ENST00000447764 270 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 AC006026.2-201ENST00000457376 180 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 SNORA59A-201ENST00000459326 152 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 RN7SL807P-201ENST00000470923 297 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 RNU7-115P-201ENST00000516433 55 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 AC090132.2-201ENST00000615881 347 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 MIR3651-201ENST00000630427 90 ntBASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.75□□□□□ -1.65
PDZRN3Q9UPQ7 AL672296.1-201ENST00000427780 2158 ntBASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 MIR514A1-201ENST00000385133 98 ntBASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 AC012306.1-201ENST00000423267 114 ntBASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 AC078918.1-201ENST00000498515 228 ntBASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 AC025754.2-201ENST00000606491 432 ntBASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 AL138880.2-201ENST00000616214 239 ntBASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDZRN3Q9UPQ7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 AC073073.2-201ENST00000609827 2578 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 RNA5SP50-201ENST00000363731 107 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 RNU6-1141P-201ENST00000364520 107 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 Y_RNA.437-201ENST00000384113 113 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 SNORA18.3-201ENST00000384122 132 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 MTATP6P21-201ENST00000440681 189 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 RPS29P2-201ENST00000479278 136 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 RN7SKP83-201ENST00000516512 178 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 RNA5SP290-201ENST00000517133 127 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 MED28P6-201ENST00000558776 231 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms