Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU6-674P-201ENST00000363831 107 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 RNA5SP97-201ENST00000365006 84 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 RNU6-438P-201ENST00000365561 103 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 MIR539-201ENST00000365690 78 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 RNA5SP496-201ENST00000391240 109 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 SNORA3C-201ENST00000408792 125 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 RNU6-735P-201ENST00000410612 107 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 RNU6-383P-201ENST00000410864 94 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 Y_RNA.629-201ENST00000411368 105 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 MTND4LP9-201ENST00000427694 174 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 RPL30P4-201ENST00000429309 333 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 RNU6-437P-201ENST00000459408 95 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 RPL31P61-201ENST00000496160 376 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 SEM1P1-201ENST00000506694 209 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 MIR6868-201ENST00000611215 58 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 AL365222.1-201ENST00000614661 98 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 RNA5SP171-201ENST00000391071 115 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 SNORD37.2-201ENST00000391075 66 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 MIR1251-201ENST00000408552 70 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 AC016717.1-201ENST00000448918 286 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 RNA5SP272-201ENST00000516095 111 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 MIR2114-201ENST00000516645 80 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 AC105245.1-201ENST00000581934 244 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 AC244505.7-201ENST00000599675 272 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 MIR8058-201ENST00000615737 89 ntBASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXD3Q9UJU5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AL356292.1-201ENST00000283110 373 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 RNA5SP322-201ENST00000363617 119 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AL512604.1-201ENST00000404812 257 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 RN7SKP101-201ENST00000411376 320 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AC009969.1-201ENST00000438726 172 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AC083863.1-201ENST00000438811 231 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 RPS27P1-201ENST00000450552 247 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AC008155.2-201ENST00000464337 397 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AC010531.2-201ENST00000465012 153 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 RPL23AP54-201ENST00000495129 419 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 RAC1P5-201ENST00000512182 576 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 RNA5SP143-201ENST00000516936 115 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 AC096577.2-201ENST00000611455 153 ntBASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXD3Q9UJU5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 RNA5SP399-201ENST00000364003 117 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 RNU6-1240P-201ENST00000365155 104 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 MIR7-3-201ENST00000384898 110 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 SNORA3.3-201ENST00000408712 125 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 MIR1278-201ENST00000408753 81 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 YPEL5P3-201ENST00000547227 352 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 SNORA51-201ENST00000606420 132 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 TUG1_4.1-201ENST00000619464 181 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 MIR5739-201ENST00000619803 80 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 LINC02471-203ENST00000641941 4752 ntBASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXD3Q9UJU5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
FOXD3Q9UJU5 CENPCP1-201ENST00000533085 2578 ntBASIC3.53□□□□□ -1.85
FOXD3Q9UJU5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
FOXD3Q9UJU5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
FOXD3Q9UJU5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 RNA5SP205-201ENST00000364653 136 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms