Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-486P-201ENST00000363116 107 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RNA5SP283-201ENST00000365604 119 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RNY3P5-201ENST00000384127 102 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-768P-201ENST00000384683 107 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RNA5SP424-201ENST00000390988 115 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 SNORA79-201ENST00000408376 140 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-57P-201ENST00000411348 103 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 ZNF702P-202ENST00000434269 1966 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RPS26P55-201ENST00000471178 356 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RPL23AP54-201ENST00000495129 419 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 RNU7-116P-201ENST00000516940 62 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 POLR3GP1-201ENST00000594073 261 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 AP003357.1-201ENST00000604497 148 ntBASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.57□□□□□ -1.84
BHLHE41Q9C0J9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-234P-201ENST00000365229 104 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 Y_RNA.393-201ENST00000383936 102 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-460P-201ENST00000391158 108 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 AL117339.2-201ENST00000430475 180 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 RNU7-197P-201ENST00000458836 62 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 AC083906.5-201ENST00000503722 328 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 AC010598.1-201ENST00000510378 103 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 AC022695.1-201ENST00000522089 237 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 AC127455.1-201ENST00000565496 145 ntBASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.56□□□□□ -1.84
BHLHE41Q9C0J9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AL356292.1-201ENST00000283110 373 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-1180P-201ENST00000364935 107 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-215P-201ENST00000365169 102 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-1323P-201ENST00000384025 107 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 SNORA3.3-201ENST00000408712 125 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AC017083.1-201ENST00000428093 483 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 SNORD65B-201ENST00000459126 73 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AC092991.1-201ENST00000477176 376 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 Y_RNA.686-201ENST00000516548 134 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-711P-201ENST00000517255 106 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AP001328.1-201ENST00000528550 176 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 RN7SL703P-201ENST00000578485 302 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AL031274.2-201ENST00000599419 203 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AC005972.2-201ENST00000604690 348 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 AC012531.5-201ENST00000611375 151 ntBASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BHLHE41Q9C0J9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-975P-201ENST00000384296 105 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 Z98941.1-201ENST00000407764 100 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 AL159169.1-201ENST00000421119 127 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 AC016717.1-201ENST00000448918 286 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-437P-201ENST00000459408 95 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-221P-201ENST00000459541 99 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 RNA5SP20-201ENST00000515976 84 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 SNORA67.7-201ENST00000516664 135 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 RNU2-56P-201ENST00000516826 190 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 RNU1-45P-201ENST00000517191 141 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 AC109329.2-201ENST00000519658 482 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 MIR3158-1-201ENST00000583596 81 ntBASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
BHLHE41Q9C0J9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 RNU4-13P-201ENST00000364019 141 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 SNORD6-201ENST00000365444 73 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms