Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC240442.1-201ENST00000616055 283 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 AC010205.1-201ENST00000616668 449 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
TRIM54Q9BYV2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 RNU6-1309P-201ENST00000363305 108 ntBASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 RNU1-23P-201ENST00000363361 144 ntBASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 AC010655.3-201ENST00000478818 450 ntBASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 SNORA40.9-201ENST00000515895 93 ntBASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 AC023824.2-201ENST00000566185 400 ntBASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 RAC1P9-201ENST00000604990 392 ntBASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
TRIM54Q9BYV2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 Y_RNA.276-201ENST00000364732 109 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 RNU6-1105P-201ENST00000384774 107 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AC004866.1-201ENST00000411748 78 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AL358176.2-201ENST00000425769 204 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 ARL5AP4-201ENST00000430731 512 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AC087499.2-201ENST00000432861 149 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 RNU7-14P-201ENST00000459331 62 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 HMGN1P10-201ENST00000474557 553 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AC074133.1-201ENST00000515696 183 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 RNU6-635P-201ENST00000516651 102 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 RNU6-826P-201ENST00000516827 104 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 RNU1-117P-201ENST00000517041 158 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AC008269.2-201ENST00000561915 1105 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 PRR13P7-201ENST00000605538 430 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AC011476.5-201ENST00000615594 130 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AC068205.3-201ENST00000636385 468 ntBASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM54Q9BYV2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 Y_RNA.149-201ENST00000363558 117 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 Y_RNA.176-201ENST00000363815 109 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 RNU6-611P-201ENST00000384276 104 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 AL357139.1-201ENST00000407792 426 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 MIR548F4-201ENST00000408515 105 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 AL139132.1-201ENST00000431587 344 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 MTND3P2-201ENST00000438452 342 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 RPS29P26-201ENST00000477483 171 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 RNU6-1143P-201ENST00000516125 104 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
TRIM54Q9BYV2 Y_RNA.183-201ENST00000363882 113 ntBASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 Y_RNA.415-201ENST00000384012 112 ntBASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 SNORA44-201ENST00000384584 132 ntBASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 RNU6-625P-201ENST00000459412 107 ntBASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 RNY3P15-201ENST00000516297 97 ntBASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 RNU6-897P-201ENST00000517135 105 ntBASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 RRN3P3-201ENST00000549207 578 ntBASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 U4atac.1-201ENST00000618345 95 ntBASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM54Q9BYV2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 RNU6-438P-201ENST00000365561 103 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 Y_RNA.498-201ENST00000384460 102 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 RNU6-713P-201ENST00000384761 107 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 MIR300-201ENST00000401138 83 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AL079342.1-201ENST00000401460 267 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AC074290.1-201ENST00000448883 135 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 RNU6-408P-201ENST00000515910 100 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 RNA5SP367-201ENST00000516557 118 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 RNU6-107P-201ENST00000516643 102 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AC018448.1-201ENST00000552843 316 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AC233702.2-202ENST00000562547 291 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AL357075.2-201ENST00000614906 189 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AC130454.1-201ENST00000622948 401 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 AC080100.1-201ENST00000624239 5356 ntBASIC2.67□□□□□ -1.98
TRIM54Q9BYV2 RNU6-238P-201ENST00000363313 106 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 Y_RNA.133-201ENST00000363428 110 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 RNU6-743P-201ENST00000364151 106 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 SNORA48.2-201ENST00000390926 124 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 MIR1302-3-201ENST00000408128 138 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms