Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MIR6767-201ENST00000637302 66 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AL390237.1-201ENST00000404226 1415 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 Y_RNA.287-201ENST00000364853 94 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 RNU6-517P-201ENST00000384362 110 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 RNY3P10-201ENST00000384764 102 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 RNU6-1031P-201ENST00000384773 107 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 MIR518E-201ENST00000385252 88 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 SNORD73A-201ENST00000386062 65 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 RN7SKP200-201ENST00000410564 320 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 MTCO2P34-201ENST00000421994 607 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC010154.1-201ENST00000425857 269 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.64□□□□□ -2.31
UPK3BQ9BT76 MTCO3P8-201ENST00000453691 755 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.64□□□□□ -2.31
UPK3BQ9BT76 RPL39P5-202ENST00000512505 151 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC025465.4-201ENST00000513422 638 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.64□□□□□ -2.31
UPK3BQ9BT76 RN7SKP265-201ENST00000516448 223 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 RNU6-1069P-201ENST00000516612 133 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 RNU6-759P-201ENST00000516740 103 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.64□□□□□ -2.31
UPK3BQ9BT76 TPRKBP2-201ENST00000565969 475 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC013244.2-201ENST00000603396 103 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC025449.1-201ENST00000603896 529 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 SNRPGP20-201ENST00000604477 205 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AL021879.1-201ENST00000611756 288 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.64□□□□□ -2.31
UPK3BQ9BT76 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
UPK3BQ9BT76 AC027514.1-201ENST00000588561 1603 ntBASIC0.64□□□□□ -2.31
UPK3BQ9BT76 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
UPK3BQ9BT76 MTND4P5-201ENST00000435821 1374 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
UPK3BQ9BT76 RNU6-1120P-201ENST00000362988 108 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 RNU5B-2P-201ENST00000363036 113 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 SNORD114-27-201ENST00000363766 70 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 MIR586-201ENST00000385035 97 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 MIR146A-201ENST00000385201 99 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 RNU11-5P-201ENST00000391216 129 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 MIR320B2-201ENST00000408479 138 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 RNU6-57P-201ENST00000411348 103 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 RPS26P42-201ENST00000413485 326 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 CETN4P-201ENST00000432407 469 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 AL356010.1-201ENST00000456364 102 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.63□□□□□ -2.31
UPK3BQ9BT76 SNORA31.4-201ENST00000516049 129 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 SCARNA16.2-201ENST00000516520 172 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 RNU6-165P-201ENST00000517170 99 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 HIF1AP1-201ENST00000553642 175 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 SUB1P2-201ENST00000556401 297 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 FAM106DP-201ENST00000586416 501 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 AC146944.4-201ENST00000602697 718 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 AL020996.3-201ENST00000606617 222 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 AC097065.2-201ENST00000608159 533 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 AP001596.2-201ENST00000608410 312 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 AC072046.2-201ENST00000618366 268 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 AC007494.3-201ENST00000624660 743 ntBASIC0.63□□□□□ -2.31
UPK3BQ9BT76 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.63□□□□□ -2.31
UPK3BQ9BT76 FGF7P2-201ENST00000332473 296 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 RNU4-21P-201ENST00000362802 126 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 Y_RNA.201-201ENST00000364052 96 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 RNU6-1286P-201ENST00000383871 107 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 RNU6-248P-201ENST00000410720 107 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 AC013410.2-201ENST00000422627 201 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 MTND3P9-201ENST00000429526 346 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.62□□□□□ -2.31
UPK3BQ9BT76 MTND4P32-201ENST00000437189 1237 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.62□□□□□ -2.31
UPK3BQ9BT76 U8.21-201ENST00000459536 136 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 Y_RNA.673-201ENST00000516306 88 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.62□□□□□ -2.31
UPK3BQ9BT76 MTND4P7-201ENST00000523876 130 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 MIR3915-201ENST00000578518 97 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 MTATP6P3-201ENST00000581686 676 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 AC068790.2-201ENST00000602601 557 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 AL359075.3-201ENST00000613288 217 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.62□□□□□ -2.31
UPK3BQ9BT76 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.62□□□□□ -2.31
UPK3BQ9BT76 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.62□□□□□ -2.31
UPK3BQ9BT76 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
UPK3BQ9BT76 Y_RNA.796-201ENST00000364268 102 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 Y_RNA.799-201ENST00000364992 102 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 RNU1-36P-201ENST00000365130 165 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 RNU6-1240P-201ENST00000365155 104 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 MIR19B1-201ENST00000384829 87 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 MT-TH-201ENST00000387441 69 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
UPK3BQ9BT76 POLR2J4-204ENST00000418424 324 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 MTND2P18-201ENST00000419962 1030 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AC008134.1-201ENST00000420943 193 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 RAB28P5-201ENST00000427490 651 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 TIMM9P3-201ENST00000428659 274 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.61□□□□□ -2.31
UPK3BQ9BT76 NDUFA5P4-201ENST00000436704 385 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.61□□□□□ -2.31
UPK3BQ9BT76 RPS29P27-201ENST00000463711 170 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AC007215.1-201ENST00000464893 276 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AC103851.1-201ENST00000506833 274 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 ACA64.5-201ENST00000516207 127 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms