Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CDC6Q99741 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.21□□□□□ -1.9
CDC6Q99741 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDC6Q99741 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CDC6Q99741 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDC6Q99741 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDC6Q99741 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CDC6Q99741 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.2□□□□□ -1.9
CDC6Q99741 Y_RNA.20-201ENST00000362479 113 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 RNU6-283P-201ENST00000364788 107 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 Y_RNA.352-201ENST00000365439 102 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 RNU6-326P-201ENST00000365480 107 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 RNU6-220P-201ENST00000390919 107 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 SNORA53-201ENST00000391141 249 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 AL603910.2-201ENST00000407268 136 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.2□□□□□ -1.9
CDC6Q99741 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 AL161788.1-201ENST00000441805 169 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 RNU7-14P-201ENST00000459331 62 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 RN7SL429P-201ENST00000479090 223 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 RN7SL489P-201ENST00000486185 223 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 RN7SL327P-201ENST00000488659 223 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.2□□□□□ -1.9
CDC6Q99741 RNU2-31P-201ENST00000516954 155 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 MIR3668-201ENST00000582138 75 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 RPL12P50-201ENST00000603116 116 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.2□□□□□ -1.9
CDC6Q99741 RN7SL853P-201ENST00000617250 223 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.2□□□□□ -1.9
CDC6Q99741 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.2□□□□□ -1.9
CDC6Q99741 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDC6Q99741 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDC6Q99741 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
CDC6Q99741 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.2□□□□□ -1.9
CDC6Q99741 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC6Q99741 Z82209.1-201ENST00000422141 2135 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC6Q99741 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC6Q99741 RNU6-545P-201ENST00000362681 104 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 U3.8-201ENST00000363675 217 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 SNORD27-201ENST00000363981 72 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 RNU6-454P-201ENST00000364292 107 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 RNU6-1305P-201ENST00000364353 104 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 Y_RNA.257-201ENST00000364596 102 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 MIR586-201ENST00000385035 97 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 RNU2-54P-201ENST00000410299 190 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 AL513477.1-202ENST00000417061 214 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC6Q99741 AC025750.2-201ENST00000442609 450 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 NDUFB4P10-201ENST00000452541 359 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 ATP5EP1-201ENST00000510257 156 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
CDC6Q99741 SNORA70.19-201ENST00000516717 90 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 AC109329.2-201ENST00000519658 482 ntBASIC3.19□□□□□ -1.9
CDC6Q99741 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC6Q99741 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC6Q99741 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC6Q99741 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CDC6Q99741 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC6Q99741 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC6Q99741 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
CDC6Q99741 SNORA51.4-201ENST00000364993 124 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 Y_RNA.383-201ENST00000383855 97 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 RNU6-301P-201ENST00000384277 107 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 Y_RNA.539-201ENST00000384635 107 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 Y_RNA.552-201ENST00000384665 112 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 MIR548B-201ENST00000385247 97 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 AC009963.1-201ENST00000417265 157 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC6Q99741 AL357552.1-201ENST00000445254 415 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 CYP2C59P-201ENST00000457790 269 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 HMGN2P9-201ENST00000476875 229 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 RNU6-155P-201ENST00000516347 100 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 RNU6-965P-201ENST00000516721 96 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 RNU6-111P-201ENST00000517179 105 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.18□□□□□ -1.9
CDC6Q99741 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDC6Q99741 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC6Q99741 AL356280.1-201ENST00000603614 379 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDC6Q99741 U2.14-201ENST00000615943 113 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.18□□□□□ -1.9
CDC6Q99741 AC138915.1-201ENST00000565427 1685 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC6Q99741 RNU6-1266P-201ENST00000362794 105 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 Y_RNA.418-201ENST00000384029 102 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 RN7SKP284-201ENST00000411002 343 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 TOMM22P2-201ENST00000430735 237 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 POLR2KP2-201ENST00000438155 177 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 AC009969.1-201ENST00000438726 172 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 MRPS10P1-201ENST00000448483 130 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 CKS1BP2-201ENST00000497342 240 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 RNU2-12P-201ENST00000517216 168 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 MIR3616-201ENST00000584070 92 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 AC141273.2-201ENST00000618989 130 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 MIR1248-201ENST00000629190 106 ntBASIC3.17□□□□□ -1.9
CDC6Q99741 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC6Q99741 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDC6Q99741 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms