Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC090049.2-201ENST00000550377 109 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-1.07□□□□□ -2.58
CFAP54Q96N23 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 RNU6-187P-201ENST00000384139 106 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-1.08□□□□□ -2.58
CFAP54Q96N23 AC015688.2-201ENST00000584523 262 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 AL353997.4-201ENST00000586196 166 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.08□□□□□ -2.58
CFAP54Q96N23 BCRP9-201ENST00000605312 388 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 MIR6079-201ENST00000635807 62 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 RNA5SP95-201ENST00000410319 137 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 RNU2-33P-201ENST00000410344 192 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 AC006366.1-201ENST00000422002 759 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 AC008267.5-201ENST00000424928 265 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 RPL26P6-201ENST00000440913 438 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 SNORA13-201ENST00000458790 133 ntBASIC-1.08□□□□□ -2.58
CFAP54Q96N23 MTND4P9-201ENST00000507819 1346 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 RNU6-1123P-201ENST00000362347 106 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 SNORA72.2-201ENST00000365028 127 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 MIR301A-201ENST00000385261 86 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 AL353997.1-201ENST00000432936 108 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 SNORA18.7-201ENST00000516910 131 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-1.09□□□□□ -2.58
CFAP54Q96N23 AC023827.1-201ENST00000569247 97 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 AL353803.5-201ENST00000599815 141 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 U8.15-201ENST00000390947 134 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 SUMO2P18-201ENST00000518873 252 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 AL022067.1-201ENST00000602426 454 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 AC012213.4-201ENST00000606457 354 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.09□□□□□ -2.58
CFAP54Q96N23 RNU6-502P-201ENST00000362419 108 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
CFAP54Q96N23 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.09□□□□□ -2.58
CFAP54Q96N23 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.09□□□□□ -2.58
CFAP54Q96N23 MRPS10P2-201ENST00000431226 381 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 MTND3P19-201ENST00000603825 345 ntBASIC-1.09□□□□□ -2.58
CFAP54Q96N23 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AC016831.2-201ENST00000417179 352 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 MTCO3P29-201ENST00000432119 779 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 MTCO2P7-201ENST00000446518 666 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 snoU13.27-201ENST00000459278 104 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 ACA59.2-201ENST00000517061 156 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AL139286.2-201ENST00000606838 396 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AC016542.1-201ENST00000608259 493 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AL603758.1-201ENST00000618654 241 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AC132825.6-201ENST00000638861 357 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AC079382.1-201ENST00000493346 557 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.1□□□□□ -2.59
CFAP54Q96N23 MIR3925-201ENST00000584674 77 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AC078795.3-201ENST00000602913 472 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AC093726.3-201ENST00000637588 150 ntBASIC-1.1□□□□□ -2.59
CFAP54Q96N23 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AC022483.1-201ENST00000514020 567 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 RNU5A-7P-201ENST00000515979 116 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 SCARNA15.2-201ENST00000516409 127 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-1.11□□□□□ -2.59
CFAP54Q96N23 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 BEND7P1-201ENST00000422058 457 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AC093019.1-201ENST00000443135 252 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AC069271.1-201ENST00000445577 156 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AL592447.1-201ENST00000447592 540 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AL133217.1-201ENST00000450980 425 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AC093850.1-201ENST00000454121 251 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 snoU13.13-201ENST00000458842 104 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AC107401.1-201ENST00000503426 685 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 RNU6-475P-201ENST00000516073 104 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 RNU5B-3P-201ENST00000516601 115 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AC011458.1-201ENST00000604034 617 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 AL451064.1-201ENST00000607718 471 ntBASIC-1.11□□□□□ -2.59
CFAP54Q96N23 RNU4-56P-201ENST00000364700 142 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 SNORD111-201ENST00000408139 94 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.12□□□□□ -2.59
CFAP54Q96N23 MTND4P33-201ENST00000556706 766 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 AL390208.1-201ENST00000605885 644 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 RNU1-86P-201ENST00000516108 154 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 RNU1-107P-201ENST00000516617 154 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-1.12□□□□□ -2.59
CFAP54Q96N23 AC006600.1-201ENST00000572529 153 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 POLR3GP2-201ENST00000588366 668 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 ELOCP21-201ENST00000412558 336 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.12□□□□□ -2.59
CFAP54Q96N23 FAM204CP-201ENST00000424489 642 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 AL365184.2-201ENST00000431139 435 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 AC093809.1-201ENST00000509155 340 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 MIR548Y-201ENST00000582739 110 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 MIR3136-201ENST00000583498 78 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 FRG1KP-201ENST00000623592 341 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 AC092104.1-201ENST00000497346 1441 ntBASIC-1.12□□□□□ -2.59
CFAP54Q96N23 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
CFAP54Q96N23 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-1.13□□□□□ -2.59
CFAP54Q96N23 snoU83B.1-201ENST00000517136 88 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 AP002001.1-203ENST00000534002 267 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 MIR3179-1-201ENST00000578940 84 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms