Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC087441.2-201ENST00000529141 262 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC136Q96JN2 AC104581.2-201ENST00000572227 430 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 MIR5701-3-201ENST00000578890 82 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 MIR5701-1-201ENST00000585138 82 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 MIR5701-2-201ENST00000615634 82 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 MIR6132-201ENST00000622083 109 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RPL23AP50-201ENST00000434149 455 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 AL353689.1-201ENST00000438895 199 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
CCDC136Q96JN2 RNU6-559P-201ENST00000516151 98 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 RNU6-277P-201ENST00000516272 106 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 RNA5SP281-201ENST00000516504 135 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 Y_RNA.706-201ENST00000516933 99 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 AC134698.4-201ENST00000523451 826 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC136Q96JN2 AC113139.1-201ENST00000605049 239 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 AC092794.2-201ENST00000620933 563 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC136Q96JN2 AC009487.4-201ENST00000624969 3585 ntBASIC2.69□□□□□ -1.98
CCDC136Q96JN2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC136Q96JN2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CCDC136Q96JN2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC136Q96JN2 RNU6-874P-201ENST00000362390 105 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 RNU6-1188P-201ENST00000363795 107 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 Y_RNA.646-201ENST00000410980 101 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 AL158823.1-201ENST00000418441 478 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 MTCO1P44-201ENST00000441935 243 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 AC016717.1-201ENST00000448918 286 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC136Q96JN2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 AP001094.1-201ENST00000579805 193 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 MIR4753-201ENST00000585119 83 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 AC100812.1-201ENST00000607622 580 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 MIR1302-1-201ENST00000637932 143 ntBASIC2.68□□□□□ -1.98
CCDC136Q96JN2 Y_RNA.106-201ENST00000363189 100 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 Y_RNA.132-201ENST00000363421 102 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 RNU6-727P-201ENST00000363592 107 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 RNU6-310P-201ENST00000384655 107 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 RNU6-159P-201ENST00000391080 106 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 MIR320B2-201ENST00000408479 138 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 RNA5SP501-201ENST00000410990 112 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC136Q96JN2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC136Q96JN2 HMGN2P9-201ENST00000476875 229 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC136Q96JN2 FRG2DP-202ENST00000566967 323 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 MIR4287-201ENST00000579398 78 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 MIR5695-201ENST00000579717 85 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 AL132765.2-201ENST00000610812 351 ntBASIC2.67□□□□□ -1.98
CCDC136Q96JN2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC136Q96JN2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC136Q96JN2 MIR10B-201ENST00000385011 110 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 MIR300-201ENST00000401138 83 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 RNA5SP504-201ENST00000410676 117 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC136Q96JN2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC136Q96JN2 MTND5P20-201ENST00000448677 143 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 AC007395.1-201ENST00000451333 677 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC136Q96JN2 AC008549.1-201ENST00000512900 643 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.66□□□□□ -1.98
CCDC136Q96JN2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 MIR3935-201ENST00000583472 104 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 AC012493.3-201ENST00000604494 112 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 AC104260.1-201ENST00000616660 539 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 AC022513.1-201ENST00000624512 117 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 MTND4LP32-201ENST00000636111 270 ntBASIC2.66□□□□□ -1.98
CCDC136Q96JN2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CCDC136Q96JN2 RNU6-245P-201ENST00000384020 107 ntBASIC2.65□□□□□ -1.99
CCDC136Q96JN2 RNU6-700P-201ENST00000391043 107 ntBASIC2.65□□□□□ -1.99
CCDC136Q96JN2 RNU2-40P-201ENST00000410833 196 ntBASIC2.65□□□□□ -1.99
CCDC136Q96JN2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC136Q96JN2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.702-201ENST00000516843 96 ntBASIC2.65□□□□□ -1.99
CCDC136Q96JN2 RNU6-1198P-201ENST00000516904 67 ntBASIC2.65□□□□□ -1.99
CCDC136Q96JN2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC136Q96JN2 CYP2C61P-201ENST00000604072 290 ntBASIC2.65□□□□□ -1.99
CCDC136Q96JN2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC136Q96JN2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC136Q96JN2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 SNORD87-201ENST00000364849 89 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 SNORA67.2-201ENST00000384300 149 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 MIR190B-201ENST00000401119 79 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 AC092423.1-201ENST00000430165 186 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 USP9YP16-201ENST00000430287 407 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 USP9YP23-201ENST00000455085 407 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 MTCO3P10-201ENST00000455912 772 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 RPL30P15-201ENST00000457129 321 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms