Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MTCO1P5-201ENST00000433573 344 ntBASIC3.38□□□□□ -1.87
SHDQ96IW2 AL161788.1-201ENST00000441805 169 ntBASIC3.38□□□□□ -1.87
SHDQ96IW2 AC025750.2-201ENST00000442609 450 ntBASIC3.38□□□□□ -1.87
SHDQ96IW2 RPL23AP67-201ENST00000465341 474 ntBASIC3.38□□□□□ -1.87
SHDQ96IW2 AC091959.1-201ENST00000495857 238 ntBASIC3.38□□□□□ -1.87
SHDQ96IW2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.38□□□□□ -1.87
SHDQ96IW2 Y_RNA.700-201ENST00000516806 100 ntBASIC3.38□□□□□ -1.87
SHDQ96IW2 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
SHDQ96IW2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SHDQ96IW2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.38□□□□□ -1.87
SHDQ96IW2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.38□□□□□ -1.87
SHDQ96IW2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SHDQ96IW2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
SHDQ96IW2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHDQ96IW2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHDQ96IW2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
SHDQ96IW2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SHDQ96IW2 AC092435.3-201ENST00000565538 3654 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHDQ96IW2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHDQ96IW2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHDQ96IW2 RNA5SP42-201ENST00000364278 115 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.37□□□□□ -1.87
SHDQ96IW2 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 RN7SL93P-201ENST00000463035 293 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 RPS29P26-201ENST00000477483 171 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 AC006483.1-201ENST00000487308 313 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 Y_RNA.679-201ENST00000516416 91 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 SNORA27.4-201ENST00000516650 95 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 RNU2-12P-201ENST00000517216 168 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 AP002001.1-203ENST00000534002 267 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.37□□□□□ -1.87
SHDQ96IW2 MIR3684-201ENST00000579779 74 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.37□□□□□ -1.87
SHDQ96IW2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.37□□□□□ -1.87
SHDQ96IW2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
SHDQ96IW2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
SHDQ96IW2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHDQ96IW2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHDQ96IW2 UBE2WP1-201ENST00000362030 340 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 Y_RNA.269-201ENST00000364685 89 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 Y_RNA.275-201ENST00000364726 110 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 Y_RNA.418-201ENST00000384029 102 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 MIR1283-1-201ENST00000408494 87 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 AC009310.1-201ENST00000414414 451 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 AL139281.1-201ENST00000422120 335 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.36□□□□□ -1.87
SHDQ96IW2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.36□□□□□ -1.87
SHDQ96IW2 MIR449C-201ENST00000516047 92 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 SNORA70.19-201ENST00000516717 90 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 AC109329.2-201ENST00000519658 482 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.36□□□□□ -1.87
SHDQ96IW2 AC244205.2-202ENST00000635781 342 ntBASIC3.36□□□□□ -1.87
SHDQ96IW2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SHDQ96IW2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHDQ96IW2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHDQ96IW2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SHDQ96IW2 Y_RNA.200-201ENST00000364018 102 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 RNU6-740P-201ENST00000364734 105 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 RNU6-546P-201ENST00000383991 107 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 Y_RNA.590-201ENST00000410140 107 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 RNU6-1199P-201ENST00000411249 104 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 RPL23AP58-201ENST00000440453 469 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 AL357552.1-201ENST00000445254 415 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 SUMO1P2-201ENST00000452524 304 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 AC090515.1-201ENST00000465295 476 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
SHDQ96IW2 RNU6-138P-201ENST00000515952 107 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 AC023043.3-201ENST00000593113 385 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 RNVU1-4-201ENST00000612985 164 ntBASIC3.35□□□□□ -1.87
SHDQ96IW2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.35□□□□□ -1.87
SHDQ96IW2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHDQ96IW2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.35□□□□□ -1.87
SHDQ96IW2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHDQ96IW2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.34□□□□□ -1.87
SHDQ96IW2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHDQ96IW2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.34□□□□□ -1.87
SHDQ96IW2 SNORD31B-201ENST00000364977 69 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 RNU6-438P-201ENST00000365561 103 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 MIR548B-201ENST00000385247 97 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 U3.40-201ENST00000408706 208 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 RNU2-61P-201ENST00000411069 191 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.34□□□□□ -1.87
SHDQ96IW2 HMGN2P9-201ENST00000476875 229 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 RN7SKP83-201ENST00000516512 178 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 MIR4672-201ENST00000583126 81 ntBASIC3.34□□□□□ -1.87
SHDQ96IW2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
SHDQ96IW2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHDQ96IW2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHDQ96IW2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SHDQ96IW2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SHDQ96IW2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHDQ96IW2 RNU6-545P-201ENST00000362681 104 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 RNU6-454P-201ENST00000364292 107 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 AL357139.1-201ENST00000407792 426 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 MIR1298-201ENST00000408783 112 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms