Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 RNU6-517P-201ENST00000384362 110 ntBASIC0.88□□□□□ -2.27
UBA3Q8TBC4 SNORA25-201ENST00000384384 134 ntBASIC0.88□□□□□ -2.27
UBA3Q8TBC4 MIR549A-201ENST00000385268 96 ntBASIC0.88□□□□□ -2.27
UBA3Q8TBC4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
UBA3Q8TBC4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
UBA3Q8TBC4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.88□□□□□ -2.27
UBA3Q8TBC4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.88□□□□□ -2.27
UBA3Q8TBC4 AC004386.2-201ENST00000441858 148 ntBASIC0.88□□□□□ -2.27
UBA3Q8TBC4 AL356010.1-201ENST00000456364 102 ntBASIC0.88□□□□□ -2.27
UBA3Q8TBC4 RNU7-138P-201ENST00000459479 64 ntBASIC0.88□□□□□ -2.27
UBA3Q8TBC4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.88□□□□□ -2.27
UBA3Q8TBC4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.88□□□□□ -2.27
UBA3Q8TBC4 AC011604.1-201ENST00000545978 196 ntBASIC0.88□□□□□ -2.27
UBA3Q8TBC4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.88□□□□□ -2.27
UBA3Q8TBC4 RNU6-1120P-201ENST00000362988 108 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 SNORA72.2-201ENST00000365028 127 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 RNU6-1235P-201ENST00000384559 107 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AL356776.1-201ENST00000406574 447 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 MTATP6P18-201ENST00000417994 673 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 MTND3P9-201ENST00000429526 346 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 MTND4P32-201ENST00000437189 1237 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 HMGN2P34-201ENST00000437647 269 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 RNU7-180P-201ENST00000459240 63 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 RNU6-498P-201ENST00000459468 107 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 SNORD116-28-201ENST00000516123 91 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 FAM106DP-201ENST00000586416 501 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AC068790.2-201ENST00000602601 557 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 Z99497.2-201ENST00000603634 310 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AC104458.1-201ENST00000608243 463 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AC072046.2-201ENST00000618366 268 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AC006001.4-201ENST00000622243 395 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 AC091931.1-201ENST00000623488 728 ntBASIC0.87□□□□□ -2.27
UBA3Q8TBC4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.87□□□□□ -2.27
UBA3Q8TBC4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
UBA3Q8TBC4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
UBA3Q8TBC4 RNU6-227P-201ENST00000362865 103 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 Y_RNA.159-201ENST00000363674 87 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 RNU6-534P-201ENST00000364877 106 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 RNU6-975P-201ENST00000384296 105 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 RNA5SP219-201ENST00000390940 113 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 AL445567.1-201ENST00000439121 144 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 MTND1P27-201ENST00000451117 902 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 RNU7-63P-201ENST00000459054 62 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 RNU6-1037P-201ENST00000459571 107 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 RPS29P27-201ENST00000463711 170 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 HMGN1P12-201ENST00000499125 195 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 CCDC34P1-201ENST00000507441 517 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 RNU6-948P-201ENST00000516374 107 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.86□□□□□ -2.27
UBA3Q8TBC4 AC016256.1-201ENST00000547971 354 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 AC026470.2-201ENST00000561492 181 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 HULC.1-201ENST00000612720 240 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 TCL6_2.1-201ENST00000615162 119 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 uc_338.34-201ENST00000617467 174 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 AC009509.4-201ENST00000619202 509 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 AC018630.2-201ENST00000534866 2403 ntBASIC0.86□□□□□ -2.27
UBA3Q8TBC4 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 RNY1P14-201ENST00000384426 108 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 RNU6-417P-201ENST00000384712 107 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 MIR613-201ENST00000385248 95 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
UBA3Q8TBC4 RNU11-5P-201ENST00000391216 129 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 RNA5SP494-201ENST00000410653 129 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AC004866.1-201ENST00000411748 78 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AL031667.1-201ENST00000440222 725 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 NFU1P2-201ENST00000448700 469 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 MTCO3P8-201ENST00000453691 755 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 RPS29P1-201ENST00000465274 159 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AC025465.4-201ENST00000513422 638 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 RNU6-430P-201ENST00000517078 107 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 CYCSP23-201ENST00000519781 313 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 MTND4P7-201ENST00000523876 130 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AL391840.1-201ENST00000571144 367 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 MIR4742-201ENST00000581069 85 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AC040904.1-201ENST00000590850 223 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AP000907.4-201ENST00000604143 237 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 Z94722.1-201ENST00000604328 474 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AL603755.1-201ENST00000619504 163 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AC027335.2-201ENST00000624030 375 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 AL359697.1-201ENST00000624879 587 ntBASIC0.85□□□□□ -2.27
UBA3Q8TBC4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
UBA3Q8TBC4 RNU5B-2P-201ENST00000363036 113 ntBASIC0.84□□□□□ -2.27
UBA3Q8TBC4 RNU6-996P-201ENST00000365438 107 ntBASIC0.84□□□□□ -2.27
UBA3Q8TBC4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.84□□□□□ -2.27
UBA3Q8TBC4 RNA5SP109-201ENST00000391010 116 ntBASIC0.84□□□□□ -2.27
UBA3Q8TBC4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms