Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MIR4658-201ENST00000584344 65 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.32□□□□□ -2.04
BEST2Q8NFU1 MIR219B-201ENST00000637023 88 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
BEST2Q8NFU1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.32□□□□□ -2.04
BEST2Q8NFU1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.31□□□□□ -2.04
BEST2Q8NFU1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
BEST2Q8NFU1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
BEST2Q8NFU1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.31□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.358-201ENST00000365491 99 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 MIR561-201ENST00000385216 97 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.31□□□□□ -2.04
BEST2Q8NFU1 USP9YP16-201ENST00000430287 407 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 AC099799.1-201ENST00000439809 192 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 USP9YP23-201ENST00000455085 407 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 RNU7-169P-201ENST00000459456 61 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 AC007215.1-201ENST00000464893 276 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 AC107032.1-201ENST00000485945 480 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 SNORD116.3-201ENST00000517176 78 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 DEFB131C-201ENST00000528817 165 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 AC018630.3-201ENST00000542637 96 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.31□□□□□ -2.04
BEST2Q8NFU1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
BEST2Q8NFU1 AC044792.1-201ENST00000593294 196 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.31□□□□□ -2.04
BEST2Q8NFU1 uc_338.22-201ENST00000622722 187 ntBASIC2.31□□□□□ -2.04
BEST2Q8NFU1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.3□□□□□ -2.04
BEST2Q8NFU1 SNORD115-8-201ENST00000363856 82 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 RNU6-743P-201ENST00000364151 106 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 SNORD115-38-201ENST00000365037 82 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.364-201ENST00000365532 101 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.395-201ENST00000383945 109 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 RNU6-26P-201ENST00000383985 107 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 RNU6-474P-201ENST00000384243 107 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.496-201ENST00000384444 101 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 AL354751.2-201ENST00000415471 210 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.3□□□□□ -2.04
BEST2Q8NFU1 WARS2P1-201ENST00000429678 537 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 AL035666.1-201ENST00000446195 348 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST2Q8NFU1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST2Q8NFU1 RNA5SP54-201ENST00000516951 92 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 RNU7-4P-201ENST00000516961 62 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 AC022616.8-201ENST00000533569 253 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST2Q8NFU1 MIR5695-201ENST00000579717 85 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 AC087588.2-201ENST00000617667 426 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 AC005562.2-201ENST00000618264 111 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 MIR1248-201ENST00000629190 106 ntBASIC2.3□□□□□ -2.04
BEST2Q8NFU1 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 BX322639.1-202ENST00000423987 2213 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 RNU4-76P-201ENST00000364509 141 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.252-201ENST00000364556 101 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 SNORA25B-201ENST00000365507 128 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 MIR10B-201ENST00000385011 110 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 SNORA69.1-201ENST00000390904 137 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.605-201ENST00000410577 105 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AC096644.2-201ENST00000429278 159 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 HMGN2P3-201ENST00000433603 273 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 HMGN2P5-201ENST00000436882 273 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AC004386.2-201ENST00000441858 148 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AL137792.2-201ENST00000443484 235 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 MTCO3P8-201ENST00000453691 755 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 U8.22-201ENST00000459141 133 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AC018868.1-201ENST00000491307 315 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST2Q8NFU1 U4atac.1-201ENST00000618345 95 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 MIR7843-201ENST00000622274 79 ntBASIC2.29□□□□□ -2.04
BEST2Q8NFU1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.31-201ENST00000362574 102 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.112-201ENST00000363250 102 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 RNU6-873P-201ENST00000363833 107 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 SNORA67.3-201ENST00000384366 140 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.557-201ENST00000384680 107 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 RNU6-159P-201ENST00000391080 106 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 MIR1289-2-201ENST00000408360 111 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 AC018865.2-201ENST00000423631 129 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 AC009238.1-201ENST00000442165 424 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 AC009237.6-201ENST00000446969 424 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.631-201ENST00000459607 101 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST2Q8NFU1 RNU6-1114P-201ENST00000516022 107 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 RNU6-1098P-201ENST00000516772 96 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 RNU2-44P-201ENST00000516795 194 ntBASIC2.28□□□□□ -2.04
BEST2Q8NFU1 RNU6-667P-201ENST00000517186 102 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms