Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AC107083.1-201ENST00000439643 279 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 SNORA70.16-201ENST00000516390 95 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 LINC00933-203ENST00000559812 219 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 AC019159.1-201ENST00000605094 187 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 AC011603.4-201ENST00000611325 277 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 AL359198.2-201ENST00000611836 194 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 MIR4679-1-201ENST00000637619 75 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AL359693.1-201ENST00000614959 2407 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 Y_RNA.179-201ENST00000363844 90 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 snoU2_19.4-201ENST00000364329 80 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 RNU6-140P-201ENST00000384566 108 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 RNU6-578P-201ENST00000390980 103 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 SNORD37.2-201ENST00000391075 66 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AL512633.1-201ENST00000399931 655 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 MIR888-201ENST00000401186 77 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 RPL26P27-201ENST00000414397 437 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 EBAG9P1-201ENST00000418955 543 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AL358075.3-201ENST00000426289 226 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AC112220.1-201ENST00000434628 355 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AC006026.2-201ENST00000457376 180 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 RPL30P12-201ENST00000474666 353 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 YWHAEP4-201ENST00000505390 198 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AC107027.2-201ENST00000512197 115 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 RNU7-121P-201ENST00000516604 62 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AC021269.2-201ENST00000532318 330 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 MIR5571-201ENST00000577998 113 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 MIR4431-201ENST00000579990 94 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 DNAJC19P2-201ENST00000593340 302 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 MIR6129-201ENST00000616087 109 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AC002076.2-201ENST00000617362 122 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 AC007318.2-201ENST00000620999 243 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 MIR6852-201ENST00000621699 66 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TTC9BQ8N6N2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 RNU6-899P-201ENST00000363947 107 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 RNU6-1048P-201ENST00000364054 107 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 Y_RNA.293-201ENST00000364908 93 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 RNU6-429P-201ENST00000384582 108 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 RNU6-460P-201ENST00000391158 108 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 ELOCP21-201ENST00000412558 336 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 AC006461.1-201ENST00000412637 326 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 AC091179.3-201ENST00000474761 144 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 AC016632.1-201ENST00000503994 196 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 RNU6-1007P-201ENST00000516586 107 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 AC009127.3-201ENST00000570531 403 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 AC073476.4-201ENST00000628409 72 ntBASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.18□□□□□ -1.9
TTC9BQ8N6N2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 AC000403.1-201ENST00000613696 3585 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 Y_RNA.43-201ENST00000362670 111 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 RNU6-137P-201ENST00000363680 108 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 MIR539-201ENST00000365690 78 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 RNU6-1056P-201ENST00000383996 107 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 Y_RNA.510-201ENST00000384511 114 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 AL590383.1-201ENST00000428602 75 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 AL135790.2-201ENST00000437701 267 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 AC007969.2-201ENST00000441891 191 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 RNU7-107P-201ENST00000459121 61 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 RNU6-453P-201ENST00000516819 85 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 RNU6-1198P-201ENST00000516904 67 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 RNA5SP170-201ENST00000517150 101 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 MIR4744-201ENST00000581563 82 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 AC006111.3-201ENST00000622137 383 ntBASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9BQ8N6N2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms