Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX5Q8N196 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX5Q8N196 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX5Q8N196 AL159152.1-201ENST00000635019 2587 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 U8.7-201ENST00000364940 136 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 RNU6-234P-201ENST00000365229 104 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 SNORA20B-201ENST00000384220 132 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 SNORD14D-201ENST00000384390 87 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 AL606845.1-201ENST00000404881 255 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 HSPE1P13-201ENST00000451143 297 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 AC093663.1-201ENST00000497190 394 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 RNU6-1337P-201ENST00000516525 95 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 RN7SKP57-201ENST00000517248 293 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 AC244505.7-201ENST00000599675 272 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 UCA1.1-201ENST00000620952 75 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX5Q8N196 SCARNA15.3-201ENST00000626315 122 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 SCARNA4.1-201ENST00000628597 123 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 U6.98-201ENST00000637157 84 ntBASIC3.98□□□□□ -1.77
SIX5Q8N196 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX5Q8N196 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX5Q8N196 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SIX5Q8N196 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX5Q8N196 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX5Q8N196 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX5Q8N196 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX5Q8N196 RNA5SP322-201ENST00000363617 119 ntBASIC3.97□□□□□ -1.77
SIX5Q8N196 RNA5SP267-201ENST00000364893 126 ntBASIC3.97□□□□□ -1.77
SIX5Q8N196 RNU6-407P-201ENST00000365280 104 ntBASIC3.97□□□□□ -1.77
SIX5Q8N196 MT-TT-201ENST00000387460 66 ntBASIC3.97□□□□□ -1.77
SIX5Q8N196 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.97□□□□□ -1.77
SIX5Q8N196 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX5Q8N196 RNU7-115P-201ENST00000516433 55 ntBASIC3.97□□□□□ -1.77
SIX5Q8N196 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX5Q8N196 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
SIX5Q8N196 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX5Q8N196 MIR5187-201ENST00000583479 76 ntBASIC3.97□□□□□ -1.77
SIX5Q8N196 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX5Q8N196 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SIX5Q8N196 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX5Q8N196 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SIX5Q8N196 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX5Q8N196 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SIX5Q8N196 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIX5Q8N196 RNA5SP51-201ENST00000364750 119 ntBASIC3.96□□□□□ -1.78
SIX5Q8N196 RNU1-89P-201ENST00000384592 164 ntBASIC3.96□□□□□ -1.78
SIX5Q8N196 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SIX5Q8N196 AL355796.1-201ENST00000406706 323 ntBASIC3.96□□□□□ -1.78
SIX5Q8N196 SNORA36B-201ENST00000410438 131 ntBASIC3.96□□□□□ -1.78
SIX5Q8N196 RNU6-57P-201ENST00000411348 103 ntBASIC3.96□□□□□ -1.78
SIX5Q8N196 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX5Q8N196 AC009414.1-201ENST00000427200 443 ntBASIC3.96□□□□□ -1.78
SIX5Q8N196 MRPS36P2-201ENST00000512569 299 ntBASIC3.96□□□□□ -1.78
SIX5Q8N196 AC112693.2-201ENST00000556538 232 ntBASIC3.96□□□□□ -1.78
SIX5Q8N196 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX5Q8N196 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIX5Q8N196 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX5Q8N196 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SIX5Q8N196 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SIX5Q8N196 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX5Q8N196 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX5Q8N196 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX5Q8N196 Y_RNA.172-201ENST00000363765 102 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 SNORA14A-201ENST00000364773 135 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 RNU6-1274P-201ENST00000384557 107 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 Y_RNA.521-201ENST00000384560 114 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 SNORA20-201ENST00000384662 132 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 MIR591-201ENST00000385290 95 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 SNORA48.2-201ENST00000390926 124 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 RNU6-383P-201ENST00000410864 94 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX5Q8N196 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX5Q8N196 RPS26P55-201ENST00000471178 356 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 AC010598.1-201ENST00000510378 103 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 AC109329.2-201ENST00000519658 482 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 AC027419.1-201ENST00000522976 328 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 XIST_intron.1-201ENST00000619444 68 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 MIR7702-201ENST00000621931 59 ntBASIC3.95□□□□□ -1.78
SIX5Q8N196 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX5Q8N196 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX5Q8N196 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SIX5Q8N196 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX5Q8N196 AC000403.1-201ENST00000613696 3585 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX5Q8N196 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
SIX5Q8N196 SNORA27.1-201ENST00000362604 124 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 RNU6-975P-201ENST00000384296 105 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 MIR490-201ENST00000384865 128 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 Y_RNA.629-201ENST00000411368 105 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 RHEBP3-201ENST00000411920 351 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX5Q8N196 AL159169.1-201ENST00000421119 127 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 MTND4LP9-201ENST00000427694 174 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 RN7SL601P-201ENST00000471221 293 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX5Q8N196 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX5Q8N196 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX5Q8N196 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX5Q8N196 SCARNA17.1-201ENST00000516211 143 ntBASIC3.94□□□□□ -1.78
SIX5Q8N196 SCARNA17.2-201ENST00000516334 143 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms